Protein–RNA interactions for Protein: Q9WU72

Tnfsf13b, Tumor necrosis factor ligand superfamily member 13B, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf13bQ9WU72 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tnfsf13bQ9WU72 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfsf13bQ9WU72 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tnfsf13bQ9WU72 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Tnfsf13bQ9WU72 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfsf13bQ9WU72 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tnfsf13bQ9WU72 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Golph3-202ENSMUST00000226517 2359 ntBASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tnfsf13bQ9WU72 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Gm12441-201ENSMUST00000121806 588 ntBASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfsf13bQ9WU72 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfsf13bQ9WU72 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfsf13bQ9WU72 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfsf13bQ9WU72 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfsf13bQ9WU72 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfsf13bQ9WU72 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.59■□□□□ 0.89
Tnfsf13bQ9WU72 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.59■□□□□ 0.89
Tnfsf13bQ9WU72 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfsf13bQ9WU72 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.59■□□□□ 0.89
Tnfsf13bQ9WU72 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfsf13bQ9WU72 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Tnfsf13bQ9WU72 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfsf13bQ9WU72 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfsf13bQ9WU72 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfsf13bQ9WU72 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfsf13bQ9WU72 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.58■□□□□ 0.89
Tnfsf13bQ9WU72 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.58■□□□□ 0.89
Tnfsf13bQ9WU72 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfsf13bQ9WU72 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfsf13bQ9WU72 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfsf13bQ9WU72 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfsf13bQ9WU72 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfsf13bQ9WU72 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfsf13bQ9WU72 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Tnfsf13bQ9WU72 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tnfsf13bQ9WU72 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfsf13bQ9WU72 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tnfsf13bQ9WU72 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfsf13bQ9WU72 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfsf13bQ9WU72 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfsf13bQ9WU72 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfsf13bQ9WU72 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfsf13bQ9WU72 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfsf13bQ9WU72 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Tnfsf13bQ9WU72 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Tnfsf13bQ9WU72 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.56■□□□□ 0.88
Tnfsf13bQ9WU72 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.56■□□□□ 0.88
Tnfsf13bQ9WU72 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Tnfsf13bQ9WU72 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfsf13bQ9WU72 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfsf13bQ9WU72 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfsf13bQ9WU72 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfsf13bQ9WU72 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Tnfsf13bQ9WU72 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfsf13bQ9WU72 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfsf13bQ9WU72 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfsf13bQ9WU72 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfsf13bQ9WU72 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfsf13bQ9WU72 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Tnfsf13bQ9WU72 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Tnfsf13bQ9WU72 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfsf13bQ9WU72 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfsf13bQ9WU72 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfsf13bQ9WU72 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.54■□□□□ 0.88
Tnfsf13bQ9WU72 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfsf13bQ9WU72 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.54■□□□□ 0.88
Tnfsf13bQ9WU72 Gm27011-201ENSMUST00000182352 972 ntBASIC20.54■□□□□ 0.88
Tnfsf13bQ9WU72 Gm5408-201ENSMUST00000197998 747 ntBASIC20.54■□□□□ 0.88
Tnfsf13bQ9WU72 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfsf13bQ9WU72 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms