Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn8aQ9WTU3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Scn8aQ9WTU3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.22■□□□□ 0.67
Scn8aQ9WTU3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Scn8aQ9WTU3 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.22■□□□□ 0.67
Scn8aQ9WTU3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn8aQ9WTU3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn8aQ9WTU3 Gm12441-201ENSMUST00000121806 588 ntBASIC19.22■□□□□ 0.67
Scn8aQ9WTU3 Gm27011-201ENSMUST00000182352 972 ntBASIC19.22■□□□□ 0.67
Scn8aQ9WTU3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.22■□□□□ 0.67
Scn8aQ9WTU3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn8aQ9WTU3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn8aQ9WTU3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.22■□□□□ 0.67
Scn8aQ9WTU3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scn8aQ9WTU3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Scn8aQ9WTU3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn8aQ9WTU3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.21■□□□□ 0.67
Scn8aQ9WTU3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scn8aQ9WTU3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scn8aQ9WTU3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn8aQ9WTU3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn8aQ9WTU3 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.21■□□□□ 0.67
Scn8aQ9WTU3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scn8aQ9WTU3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Scn8aQ9WTU3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn8aQ9WTU3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn8aQ9WTU3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn8aQ9WTU3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn8aQ9WTU3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn8aQ9WTU3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn8aQ9WTU3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Scn8aQ9WTU3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Scn8aQ9WTU3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn8aQ9WTU3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.2■□□□□ 0.66
Scn8aQ9WTU3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.19■□□□□ 0.66
Scn8aQ9WTU3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Scn8aQ9WTU3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn8aQ9WTU3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn8aQ9WTU3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn8aQ9WTU3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Scn8aQ9WTU3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn8aQ9WTU3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn8aQ9WTU3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn8aQ9WTU3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn8aQ9WTU3 Notumos-201ENSMUST00000151998 2659 ntBASIC19.19■□□□□ 0.66
Scn8aQ9WTU3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn8aQ9WTU3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn8aQ9WTU3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn8aQ9WTU3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn8aQ9WTU3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn8aQ9WTU3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn8aQ9WTU3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.18■□□□□ 0.66
Scn8aQ9WTU3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.18■□□□□ 0.66
Scn8aQ9WTU3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn8aQ9WTU3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scn8aQ9WTU3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Scn8aQ9WTU3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scn8aQ9WTU3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Gm10602-201ENSMUST00000098239 609 ntBASIC19.17■□□□□ 0.66
Scn8aQ9WTU3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn8aQ9WTU3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn8aQ9WTU3 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms