Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 BC021767-201ENSMUST00000126387 1716 ntBASIC19.24■□□□□ 0.67
Msh5Q9QUM7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Msh5Q9QUM7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Msh5Q9QUM7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh5Q9QUM7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Msh5Q9QUM7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh5Q9QUM7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh5Q9QUM7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.23■□□□□ 0.67
Msh5Q9QUM7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 Gm43173-201ENSMUST00000202246 593 ntBASIC19.23■□□□□ 0.67
Msh5Q9QUM7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Msh5Q9QUM7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh5Q9QUM7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh5Q9QUM7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh5Q9QUM7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Msh5Q9QUM7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.22■□□□□ 0.67
Msh5Q9QUM7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.22■□□□□ 0.67
Msh5Q9QUM7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh5Q9QUM7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Msh5Q9QUM7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh5Q9QUM7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Msh5Q9QUM7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh5Q9QUM7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
Msh5Q9QUM7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh5Q9QUM7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Msh5Q9QUM7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh5Q9QUM7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh5Q9QUM7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh5Q9QUM7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Msh5Q9QUM7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Msh5Q9QUM7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Msh5Q9QUM7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.19■□□□□ 0.66
Msh5Q9QUM7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh5Q9QUM7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh5Q9QUM7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh5Q9QUM7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Msh5Q9QUM7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh5Q9QUM7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh5Q9QUM7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
Msh5Q9QUM7 Gm43017-201ENSMUST00000198296 752 ntBASIC19.18■□□□□ 0.66
Msh5Q9QUM7 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC19.18■□□□□ 0.66
Msh5Q9QUM7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Msh5Q9QUM7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.18■□□□□ 0.66
Msh5Q9QUM7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Msh5Q9QUM7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.18■□□□□ 0.66
Msh5Q9QUM7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh5Q9QUM7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.18■□□□□ 0.66
Msh5Q9QUM7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh5Q9QUM7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Msh5Q9QUM7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.17■□□□□ 0.66
Msh5Q9QUM7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.17■□□□□ 0.66
Msh5Q9QUM7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.17■□□□□ 0.66
Msh5Q9QUM7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.17■□□□□ 0.66
Msh5Q9QUM7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms