Protein–RNA interactions for Protein: Q9JJR9

Nrip3, Nuclear receptor-interacting protein 3, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrip3Q9JJR9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.15■□□□□ 0.34
Nrip3Q9JJR9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Nrip3Q9JJR9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nrip3Q9JJR9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nrip3Q9JJR9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Nrip3Q9JJR9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nrip3Q9JJR9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nrip3Q9JJR9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nrip3Q9JJR9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nrip3Q9JJR9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
Nrip3Q9JJR9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nrip3Q9JJR9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Grk6-206ENSMUST00000224995 2971 ntBASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.14■□□□□ 0.33
Nrip3Q9JJR9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nrip3Q9JJR9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nrip3Q9JJR9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nrip3Q9JJR9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nrip3Q9JJR9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nrip3Q9JJR9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nrip3Q9JJR9 Gm14117-201ENSMUST00000122417 843 ntBASIC17.13■□□□□ 0.33
Nrip3Q9JJR9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nrip3Q9JJR9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nrip3Q9JJR9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.13■□□□□ 0.33
Nrip3Q9JJR9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nrip3Q9JJR9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nrip3Q9JJR9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nrip3Q9JJR9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nrip3Q9JJR9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nrip3Q9JJR9 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Rarb-207ENSMUST00000225921 2756 ntBASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrip3Q9JJR9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nrip3Q9JJR9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.09■□□□□ 0.33
Nrip3Q9JJR9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nrip3Q9JJR9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nrip3Q9JJR9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nrip3Q9JJR9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nrip3Q9JJR9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms