Protein–RNA interactions for Protein: Q9JJ89

Ccdc86, Coiled-coil domain-containing protein 86, mousemouse

Predictions only

Length 426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc86Q9JJ89 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc86Q9JJ89 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc86Q9JJ89 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc86Q9JJ89 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc86Q9JJ89 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.41■□□□□ 0.7
Ccdc86Q9JJ89 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc86Q9JJ89 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc86Q9JJ89 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc86Q9JJ89 Gm10493-201ENSMUST00000097270 612 ntBASIC19.41■□□□□ 0.7
Ccdc86Q9JJ89 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc86Q9JJ89 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc86Q9JJ89 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ccdc86Q9JJ89 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc86Q9JJ89 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc86Q9JJ89 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc86Q9JJ89 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc86Q9JJ89 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc86Q9JJ89 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc86Q9JJ89 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.39■□□□□ 0.69
Ccdc86Q9JJ89 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc86Q9JJ89 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ccdc86Q9JJ89 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc86Q9JJ89 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.39■□□□□ 0.69
Ccdc86Q9JJ89 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc86Q9JJ89 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc86Q9JJ89 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc86Q9JJ89 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc86Q9JJ89 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc86Q9JJ89 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc86Q9JJ89 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc86Q9JJ89 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc86Q9JJ89 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc86Q9JJ89 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc86Q9JJ89 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc86Q9JJ89 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc86Q9JJ89 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc86Q9JJ89 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc86Q9JJ89 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc86Q9JJ89 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.37■□□□□ 0.69
Ccdc86Q9JJ89 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Ccdc86Q9JJ89 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc86Q9JJ89 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc86Q9JJ89 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc86Q9JJ89 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc86Q9JJ89 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc86Q9JJ89 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc86Q9JJ89 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ccdc86Q9JJ89 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc86Q9JJ89 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.36■□□□□ 0.69
Ccdc86Q9JJ89 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc86Q9JJ89 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccdc86Q9JJ89 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.36■□□□□ 0.69
Ccdc86Q9JJ89 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc86Q9JJ89 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc86Q9JJ89 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.36■□□□□ 0.69
Ccdc86Q9JJ89 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc86Q9JJ89 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc86Q9JJ89 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc86Q9JJ89 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc86Q9JJ89 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc86Q9JJ89 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.35■□□□□ 0.69
Ccdc86Q9JJ89 BC021767-201ENSMUST00000126387 1716 ntBASIC19.35■□□□□ 0.69
Ccdc86Q9JJ89 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc86Q9JJ89 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.35■□□□□ 0.69
Ccdc86Q9JJ89 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc86Q9JJ89 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc86Q9JJ89 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc86Q9JJ89 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc86Q9JJ89 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc86Q9JJ89 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc86Q9JJ89 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms