Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb1Q9JIF7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb1Q9JIF7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Copb1Q9JIF7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb1Q9JIF7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb1Q9JIF7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.74■□□□□ 0.91
Copb1Q9JIF7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb1Q9JIF7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb1Q9JIF7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Copb1Q9JIF7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb1Q9JIF7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Copb1Q9JIF7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb1Q9JIF7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb1Q9JIF7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Copb1Q9JIF7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb1Q9JIF7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb1Q9JIF7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.73■□□□□ 0.91
Copb1Q9JIF7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.73■□□□□ 0.91
Copb1Q9JIF7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb1Q9JIF7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb1Q9JIF7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb1Q9JIF7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb1Q9JIF7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb1Q9JIF7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb1Q9JIF7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb1Q9JIF7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb1Q9JIF7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Copb1Q9JIF7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Copb1Q9JIF7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Copb1Q9JIF7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Copb1Q9JIF7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Copb1Q9JIF7 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.72■□□□□ 0.91
Copb1Q9JIF7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Copb1Q9JIF7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Copb1Q9JIF7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Copb1Q9JIF7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Copb1Q9JIF7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Copb1Q9JIF7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Copb1Q9JIF7 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.72■□□□□ 0.91
Copb1Q9JIF7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Copb1Q9JIF7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.72■□□□□ 0.91
Copb1Q9JIF7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Copb1Q9JIF7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Copb1Q9JIF7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Copb1Q9JIF7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Copb1Q9JIF7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Copb1Q9JIF7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.71■□□□□ 0.91
Copb1Q9JIF7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Copb1Q9JIF7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Copb1Q9JIF7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Copb1Q9JIF7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb1Q9JIF7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb1Q9JIF7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb1Q9JIF7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb1Q9JIF7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb1Q9JIF7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb1Q9JIF7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.7■□□□□ 0.9
Copb1Q9JIF7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb1Q9JIF7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb1Q9JIF7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.7■□□□□ 0.9
Copb1Q9JIF7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb1Q9JIF7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb1Q9JIF7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Copb1Q9JIF7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Copb1Q9JIF7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.69■□□□□ 0.9
Copb1Q9JIF7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Copb1Q9JIF7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.69■□□□□ 0.9
Copb1Q9JIF7 Gm21956-201ENSMUST00000179946 522 ntBASIC20.69■□□□□ 0.9
Copb1Q9JIF7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Copb1Q9JIF7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Copb1Q9JIF7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Copb1Q9JIF7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Copb1Q9JIF7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
Copb1Q9JIF7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Copb1Q9JIF7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Copb1Q9JIF7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Copb1Q9JIF7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Copb1Q9JIF7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Copb1Q9JIF7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
Copb1Q9JIF7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Copb1Q9JIF7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.68■□□□□ 0.9
Copb1Q9JIF7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Copb1Q9JIF7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Copb1Q9JIF7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Copb1Q9JIF7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Copb1Q9JIF7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb1Q9JIF7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb1Q9JIF7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb1Q9JIF7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Copb1Q9JIF7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Copb1Q9JIF7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Copb1Q9JIF7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Copb1Q9JIF7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Copb1Q9JIF7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb1Q9JIF7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb1Q9JIF7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.67■□□□□ 0.9
Copb1Q9JIF7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Copb1Q9JIF7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms