Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4bQ9ES00 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.21■□□□□ 0.51
Ube4bQ9ES00 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4bQ9ES00 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ube4bQ9ES00 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4bQ9ES00 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.21■□□□□ 0.5
Ube4bQ9ES00 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube4bQ9ES00 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube4bQ9ES00 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ube4bQ9ES00 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube4bQ9ES00 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ube4bQ9ES00 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube4bQ9ES00 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube4bQ9ES00 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube4bQ9ES00 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.19■□□□□ 0.5
Ube4bQ9ES00 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube4bQ9ES00 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ube4bQ9ES00 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube4bQ9ES00 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.19■□□□□ 0.5
Ube4bQ9ES00 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ube4bQ9ES00 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube4bQ9ES00 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube4bQ9ES00 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube4bQ9ES00 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ube4bQ9ES00 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ube4bQ9ES00 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube4bQ9ES00 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.18■□□□□ 0.5
Ube4bQ9ES00 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.18■□□□□ 0.5
Ube4bQ9ES00 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube4bQ9ES00 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ube4bQ9ES00 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.18■□□□□ 0.5
Ube4bQ9ES00 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube4bQ9ES00 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.18■□□□□ 0.5
Ube4bQ9ES00 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube4bQ9ES00 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.17■□□□□ 0.5
Ube4bQ9ES00 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube4bQ9ES00 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube4bQ9ES00 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Ube4bQ9ES00 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube4bQ9ES00 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube4bQ9ES00 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube4bQ9ES00 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube4bQ9ES00 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube4bQ9ES00 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Ube4bQ9ES00 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ube4bQ9ES00 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube4bQ9ES00 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube4bQ9ES00 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ube4bQ9ES00 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube4bQ9ES00 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube4bQ9ES00 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ube4bQ9ES00 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube4bQ9ES00 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube4bQ9ES00 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ube4bQ9ES00 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ube4bQ9ES00 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube4bQ9ES00 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ube4bQ9ES00 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ube4bQ9ES00 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube4bQ9ES00 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ube4bQ9ES00 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ube4bQ9ES00 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ube4bQ9ES00 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ube4bQ9ES00 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 572.7 ms