Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb3Q9ERD7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb3Q9ERD7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb3Q9ERD7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb3Q9ERD7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb3Q9ERD7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Tubb3Q9ERD7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb3Q9ERD7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb3Q9ERD7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubb3Q9ERD7 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.85■□□□□ 0.61
Tubb3Q9ERD7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Rarb-207ENSMUST00000225921 2756 ntBASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tubb3Q9ERD7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tubb3Q9ERD7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tubb3Q9ERD7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tubb3Q9ERD7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Tubb3Q9ERD7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tubb3Q9ERD7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tubb3Q9ERD7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tubb3Q9ERD7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Tubb3Q9ERD7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Tubb3Q9ERD7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb3Q9ERD7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb3Q9ERD7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.83■□□□□ 0.6
Tubb3Q9ERD7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb3Q9ERD7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.83■□□□□ 0.6
Tubb3Q9ERD7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Tubb3Q9ERD7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb3Q9ERD7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb3Q9ERD7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Tubb3Q9ERD7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb3Q9ERD7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb3Q9ERD7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Tubb3Q9ERD7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.82■□□□□ 0.6
Tubb3Q9ERD7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb3Q9ERD7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb3Q9ERD7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.82■□□□□ 0.6
Tubb3Q9ERD7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.82■□□□□ 0.6
Tubb3Q9ERD7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.82■□□□□ 0.6
Tubb3Q9ERD7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb3Q9ERD7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb3Q9ERD7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb3Q9ERD7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb3Q9ERD7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tubb3Q9ERD7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.81■□□□□ 0.6
Tubb3Q9ERD7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
Tubb3Q9ERD7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb3Q9ERD7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb3Q9ERD7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb3Q9ERD7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb3Q9ERD7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb3Q9ERD7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb3Q9ERD7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb3Q9ERD7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb3Q9ERD7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tubb3Q9ERD7 Gm11421-201ENSMUST00000122124 294 ntBASIC18.8■□□□□ 0.6
Tubb3Q9ERD7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tubb3Q9ERD7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb3Q9ERD7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb3Q9ERD7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb3Q9ERD7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb3Q9ERD7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb3Q9ERD7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb3Q9ERD7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.79■□□□□ 0.6
Tubb3Q9ERD7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.79■□□□□ 0.6
Tubb3Q9ERD7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
Tubb3Q9ERD7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb3Q9ERD7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb3Q9ERD7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.79■□□□□ 0.6
Tubb3Q9ERD7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb3Q9ERD7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubb3Q9ERD7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubb3Q9ERD7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.78■□□□□ 0.6
Tubb3Q9ERD7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Tubb3Q9ERD7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.78■□□□□ 0.6
Tubb3Q9ERD7 Grk6-206ENSMUST00000224995 2971 ntBASIC18.78■□□□□ 0.6
Tubb3Q9ERD7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Tubb3Q9ERD7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubb3Q9ERD7 Gm10493-201ENSMUST00000097270 612 ntBASIC18.78■□□□□ 0.6
Tubb3Q9ERD7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.78■□□□□ 0.6
Tubb3Q9ERD7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Tubb3Q9ERD7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms