Protein–RNA interactions for Protein: Q9EPE9

Atp13a1, Manganese-transporting ATPase 13A1, mousemouse

Known RBP Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a1Q9EPE9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a1Q9EPE9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a1Q9EPE9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a1Q9EPE9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a1Q9EPE9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a1Q9EPE9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a1Q9EPE9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a1Q9EPE9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a1Q9EPE9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Atp13a1Q9EPE9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a1Q9EPE9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a1Q9EPE9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a1Q9EPE9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a1Q9EPE9 Gm13148-201ENSMUST00000118892 745 ntBASIC20.5■□□□□ 0.87
Atp13a1Q9EPE9 Gm6211-202ENSMUST00000167849 925 ntBASIC20.5■□□□□ 0.87
Atp13a1Q9EPE9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a1Q9EPE9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a1Q9EPE9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a1Q9EPE9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a1Q9EPE9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a1Q9EPE9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Atp13a1Q9EPE9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp13a1Q9EPE9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Atp13a1Q9EPE9 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.49■□□□□ 0.87
Atp13a1Q9EPE9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Atp13a1Q9EPE9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Atp13a1Q9EPE9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Atp13a1Q9EPE9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp13a1Q9EPE9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp13a1Q9EPE9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp13a1Q9EPE9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Atp13a1Q9EPE9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Atp13a1Q9EPE9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Atp13a1Q9EPE9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp13a1Q9EPE9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
Atp13a1Q9EPE9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.48■□□□□ 0.87
Atp13a1Q9EPE9 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.48■□□□□ 0.87
Atp13a1Q9EPE9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.48■□□□□ 0.87
Atp13a1Q9EPE9 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.48■□□□□ 0.87
Atp13a1Q9EPE9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp13a1Q9EPE9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp13a1Q9EPE9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.48■□□□□ 0.87
Atp13a1Q9EPE9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Atp13a1Q9EPE9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a1Q9EPE9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a1Q9EPE9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a1Q9EPE9 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.47■□□□□ 0.87
Atp13a1Q9EPE9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Atp13a1Q9EPE9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a1Q9EPE9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Atp13a1Q9EPE9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Atp13a1Q9EPE9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a1Q9EPE9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a1Q9EPE9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.47■□□□□ 0.87
Atp13a1Q9EPE9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
Atp13a1Q9EPE9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Atp13a1Q9EPE9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atp13a1Q9EPE9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atp13a1Q9EPE9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atp13a1Q9EPE9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms