Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp2aQ9DB34 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.75■□□□□ 0.75
Chmp2aQ9DB34 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.75■□□□□ 0.75
Chmp2aQ9DB34 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2aQ9DB34 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2aQ9DB34 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2aQ9DB34 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.75■□□□□ 0.75
Chmp2aQ9DB34 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2aQ9DB34 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2aQ9DB34 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2aQ9DB34 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Chmp2aQ9DB34 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.75■□□□□ 0.75
Chmp2aQ9DB34 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2aQ9DB34 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.75■□□□□ 0.75
Chmp2aQ9DB34 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2aQ9DB34 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp2aQ9DB34 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp2aQ9DB34 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp2aQ9DB34 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp2aQ9DB34 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Chmp2aQ9DB34 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp2aQ9DB34 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp2aQ9DB34 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp2aQ9DB34 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Chmp2aQ9DB34 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp2aQ9DB34 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp2aQ9DB34 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp2aQ9DB34 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp2aQ9DB34 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.73■□□□□ 0.75
Chmp2aQ9DB34 Gm18671-201ENSMUST00000214826 683 ntBASIC19.73■□□□□ 0.75
Chmp2aQ9DB34 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Chmp2aQ9DB34 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp2aQ9DB34 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp2aQ9DB34 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp2aQ9DB34 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp2aQ9DB34 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Chmp2aQ9DB34 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2aQ9DB34 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Chmp2aQ9DB34 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp2aQ9DB34 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Chmp2aQ9DB34 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp2aQ9DB34 Gm7860-201ENSMUST00000121190 879 ntBASIC19.71■□□□□ 0.75
Chmp2aQ9DB34 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.71■□□□□ 0.75
Chmp2aQ9DB34 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp2aQ9DB34 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Chmp2aQ9DB34 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp2aQ9DB34 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp2aQ9DB34 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp2aQ9DB34 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Chmp2aQ9DB34 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp2aQ9DB34 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Chmp2aQ9DB34 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.7■□□□□ 0.74
Chmp2aQ9DB34 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
Chmp2aQ9DB34 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp2aQ9DB34 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp2aQ9DB34 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Chmp2aQ9DB34 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.7■□□□□ 0.74
Chmp2aQ9DB34 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp2aQ9DB34 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 Gm13234-201ENSMUST00000120010 747 ntBASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 Gm26571-201ENSMUST00000181399 666 ntBASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Chmp2aQ9DB34 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp2aQ9DB34 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp2aQ9DB34 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms