Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Gm6420-201ENSMUST00000193885 723 ntBASIC18.55■□□□□ 0.56
Rsph9Q9D9V4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rsph9Q9D9V4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rsph9Q9D9V4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
Rsph9Q9D9V4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rsph9Q9D9V4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Iqck-206ENSMUST00000208658 2891 ntBASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rsph9Q9D9V4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Gm7290-201ENSMUST00000104990 617 ntBASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Gm12918-201ENSMUST00000120234 636 ntBASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Gm15710-201ENSMUST00000121821 636 ntBASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Gm5075-201ENSMUST00000196916 622 ntBASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.53■□□□□ 0.56
Rsph9Q9D9V4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rsph9Q9D9V4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rsph9Q9D9V4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.52■□□□□ 0.56
Rsph9Q9D9V4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.52■□□□□ 0.56
Rsph9Q9D9V4 Nespas-201ENSMUST00000143738 1083 ntBASIC18.52■□□□□ 0.56
Rsph9Q9D9V4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
Rsph9Q9D9V4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rsph9Q9D9V4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Rsph9Q9D9V4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Rsph9Q9D9V4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 Gm27011-201ENSMUST00000182352 972 ntBASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 Gm6365-201ENSMUST00000054711 744 ntBASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rsph9Q9D9V4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rsph9Q9D9V4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rsph9Q9D9V4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rsph9Q9D9V4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph9Q9D9V4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph9Q9D9V4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph9Q9D9V4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph9Q9D9V4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph9Q9D9V4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph9Q9D9V4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rsph9Q9D9V4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Rsph9Q9D9V4 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.49■□□□□ 0.55
Rsph9Q9D9V4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph9Q9D9V4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph9Q9D9V4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph9Q9D9V4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms