Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Vps33aQ9D2N9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Vps33aQ9D2N9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Vps33aQ9D2N9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps33aQ9D2N9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps33aQ9D2N9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps33aQ9D2N9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps33aQ9D2N9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps33aQ9D2N9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
Vps33aQ9D2N9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Vps33aQ9D2N9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Vps33aQ9D2N9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Vps33aQ9D2N9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps33aQ9D2N9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps33aQ9D2N9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vps33aQ9D2N9 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.11■□□□□ 0.81
Vps33aQ9D2N9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps33aQ9D2N9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps33aQ9D2N9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vps33aQ9D2N9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.11■□□□□ 0.81
Vps33aQ9D2N9 Gm7143-201ENSMUST00000222811 859 ntBASIC20.11■□□□□ 0.81
Vps33aQ9D2N9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Vps33aQ9D2N9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps33aQ9D2N9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps33aQ9D2N9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps33aQ9D2N9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps33aQ9D2N9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps33aQ9D2N9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Vps33aQ9D2N9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Vps33aQ9D2N9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps33aQ9D2N9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps33aQ9D2N9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Vps33aQ9D2N9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps33aQ9D2N9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps33aQ9D2N9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps33aQ9D2N9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Vps33aQ9D2N9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps33aQ9D2N9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps33aQ9D2N9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Vps33aQ9D2N9 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.09■□□□□ 0.81
Vps33aQ9D2N9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps33aQ9D2N9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps33aQ9D2N9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps33aQ9D2N9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps33aQ9D2N9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Vps33aQ9D2N9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps33aQ9D2N9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps33aQ9D2N9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps33aQ9D2N9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Vps33aQ9D2N9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.08■□□□□ 0.81
Vps33aQ9D2N9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps33aQ9D2N9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps33aQ9D2N9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
Vps33aQ9D2N9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Vps33aQ9D2N9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps33aQ9D2N9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps33aQ9D2N9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Vps33aQ9D2N9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps33aQ9D2N9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33aQ9D2N9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33aQ9D2N9 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.07■□□□□ 0.8
Vps33aQ9D2N9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.07■□□□□ 0.8
Vps33aQ9D2N9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33aQ9D2N9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33aQ9D2N9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33aQ9D2N9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.06■□□□□ 0.8
Vps33aQ9D2N9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33aQ9D2N9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33aQ9D2N9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.06■□□□□ 0.8
Vps33aQ9D2N9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33aQ9D2N9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Vps33aQ9D2N9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.06■□□□□ 0.8
Vps33aQ9D2N9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33aQ9D2N9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33aQ9D2N9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.06■□□□□ 0.8
Vps33aQ9D2N9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33aQ9D2N9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms