Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim42Q9D2H5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim42Q9D2H5 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim42Q9D2H5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim42Q9D2H5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim42Q9D2H5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Gm9870-201ENSMUST00000063874 645 ntBASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim42Q9D2H5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Etf1-202ENSMUST00000180351 108 ntBASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trim42Q9D2H5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim42Q9D2H5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim42Q9D2H5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim42Q9D2H5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim42Q9D2H5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.89■□□□□ 0.61
Trim42Q9D2H5 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.89■□□□□ 0.61
Trim42Q9D2H5 Gm5921-201ENSMUST00000075898 882 ntBASIC18.89■□□□□ 0.61
Trim42Q9D2H5 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.89■□□□□ 0.61
Trim42Q9D2H5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim42Q9D2H5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim42Q9D2H5 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.89■□□□□ 0.61
Trim42Q9D2H5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim42Q9D2H5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim42Q9D2H5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim42Q9D2H5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Trim42Q9D2H5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trim42Q9D2H5 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.87■□□□□ 0.61
Trim42Q9D2H5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim42Q9D2H5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim42Q9D2H5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim42Q9D2H5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim42Q9D2H5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim42Q9D2H5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trim42Q9D2H5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim42Q9D2H5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim42Q9D2H5 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.87■□□□□ 0.61
Trim42Q9D2H5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim42Q9D2H5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim42Q9D2H5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim42Q9D2H5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim42Q9D2H5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim42Q9D2H5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim42Q9D2H5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Trim42Q9D2H5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.86■□□□□ 0.61
Trim42Q9D2H5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim42Q9D2H5 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.86■□□□□ 0.61
Trim42Q9D2H5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trim42Q9D2H5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim42Q9D2H5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms