Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.09■□□□□ 0.33
Mrps28Q9CY16 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mrps28Q9CY16 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrps28Q9CY16 Gm7860-201ENSMUST00000121190 879 ntBASIC17.09■□□□□ 0.33
Mrps28Q9CY16 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrps28Q9CY16 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrps28Q9CY16 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrps28Q9CY16 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrps28Q9CY16 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Mrps28Q9CY16 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrps28Q9CY16 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrps28Q9CY16 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.08■□□□□ 0.33
Mrps28Q9CY16 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Mrps28Q9CY16 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Mrps28Q9CY16 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Mrps28Q9CY16 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Mrps28Q9CY16 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mrps28Q9CY16 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mrps28Q9CY16 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrps28Q9CY16 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mrps28Q9CY16 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mrps28Q9CY16 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.08■□□□□ 0.32
Mrps28Q9CY16 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.08■□□□□ 0.32
Mrps28Q9CY16 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mrps28Q9CY16 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Mrps28Q9CY16 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrps28Q9CY16 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Mrps28Q9CY16 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Mrps28Q9CY16 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mrps28Q9CY16 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.07■□□□□ 0.32
Mrps28Q9CY16 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mrps28Q9CY16 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Mrps28Q9CY16 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.07■□□□□ 0.32
Mrps28Q9CY16 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mrps28Q9CY16 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrps28Q9CY16 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mrps28Q9CY16 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrps28Q9CY16 Gm9988-201ENSMUST00000069786 435 ntBASIC17.07■□□□□ 0.32
Mrps28Q9CY16 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Mrps28Q9CY16 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrps28Q9CY16 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrps28Q9CY16 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Mrps28Q9CY16 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrps28Q9CY16 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Mrps28Q9CY16 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrps28Q9CY16 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrps28Q9CY16 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.05■□□□□ 0.32
Mrps28Q9CY16 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrps28Q9CY16 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.05■□□□□ 0.32
Mrps28Q9CY16 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrps28Q9CY16 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrps28Q9CY16 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrps28Q9CY16 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrps28Q9CY16 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrps28Q9CY16 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrps28Q9CY16 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Mrps28Q9CY16 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mrps28Q9CY16 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrps28Q9CY16 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
Mrps28Q9CY16 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrps28Q9CY16 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Mrps28Q9CY16 Gm10493-201ENSMUST00000097270 612 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms