Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Gm10493-201ENSMUST00000097270 612 ntBASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Gm37352-201ENSMUST00000193908 2181 ntBASIC20■□□□□ 0.79
Rpa3Q9CQ71 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpa3Q9CQ71 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.99■□□□□ 0.79
Rpa3Q9CQ71 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa3Q9CQ71 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa3Q9CQ71 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rpa3Q9CQ71 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.99■□□□□ 0.79
Rpa3Q9CQ71 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa3Q9CQ71 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rpa3Q9CQ71 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rpa3Q9CQ71 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa3Q9CQ71 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa3Q9CQ71 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa3Q9CQ71 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa3Q9CQ71 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa3Q9CQ71 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpa3Q9CQ71 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpa3Q9CQ71 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpa3Q9CQ71 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpa3Q9CQ71 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rpa3Q9CQ71 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.98■□□□□ 0.79
Rpa3Q9CQ71 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.98■□□□□ 0.79
Rpa3Q9CQ71 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Rpa3Q9CQ71 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpa3Q9CQ71 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpa3Q9CQ71 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpa3Q9CQ71 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpa3Q9CQ71 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpa3Q9CQ71 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Rpa3Q9CQ71 Gm38205-201ENSMUST00000192243 258 ntBASIC19.97■□□□□ 0.79
Rpa3Q9CQ71 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Rpa3Q9CQ71 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpa3Q9CQ71 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Rpa3Q9CQ71 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa3Q9CQ71 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rpa3Q9CQ71 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa3Q9CQ71 Reep4-203ENSMUST00000226563 1444 ntBASIC19.95■□□□□ 0.78
Rpa3Q9CQ71 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rpa3Q9CQ71 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa3Q9CQ71 Gm42778-201ENSMUST00000199644 553 ntBASIC19.95■□□□□ 0.78
Rpa3Q9CQ71 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa3Q9CQ71 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Rpa3Q9CQ71 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.95■□□□□ 0.78
Rpa3Q9CQ71 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa3Q9CQ71 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa3Q9CQ71 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.95■□□□□ 0.78
Rpa3Q9CQ71 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Rpa3Q9CQ71 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa3Q9CQ71 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa3Q9CQ71 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa3Q9CQ71 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rpa3Q9CQ71 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.94■□□□□ 0.78
Rpa3Q9CQ71 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rpa3Q9CQ71 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.94■□□□□ 0.78
Rpa3Q9CQ71 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa3Q9CQ71 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa3Q9CQ71 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa3Q9CQ71 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms