Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim8Q99PJ2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.53■□□□□ 0.56
Trim8Q99PJ2 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.53■□□□□ 0.56
Trim8Q99PJ2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim8Q99PJ2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim8Q99PJ2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim8Q99PJ2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim8Q99PJ2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trim8Q99PJ2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim8Q99PJ2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim8Q99PJ2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.52■□□□□ 0.56
Trim8Q99PJ2 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.52■□□□□ 0.56
Trim8Q99PJ2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim8Q99PJ2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim8Q99PJ2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.52■□□□□ 0.55
Trim8Q99PJ2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim8Q99PJ2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim8Q99PJ2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Trim8Q99PJ2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Trim8Q99PJ2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim8Q99PJ2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim8Q99PJ2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim8Q99PJ2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim8Q99PJ2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim8Q99PJ2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trim8Q99PJ2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trim8Q99PJ2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trim8Q99PJ2 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.51■□□□□ 0.55
Trim8Q99PJ2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim8Q99PJ2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim8Q99PJ2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trim8Q99PJ2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim8Q99PJ2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim8Q99PJ2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Trim8Q99PJ2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trim8Q99PJ2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim8Q99PJ2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
Trim8Q99PJ2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim8Q99PJ2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim8Q99PJ2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
Trim8Q99PJ2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim8Q99PJ2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim8Q99PJ2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim8Q99PJ2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim8Q99PJ2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim8Q99PJ2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim8Q99PJ2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim8Q99PJ2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim8Q99PJ2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim8Q99PJ2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim8Q99PJ2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim8Q99PJ2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim8Q99PJ2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim8Q99PJ2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim8Q99PJ2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim8Q99PJ2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim8Q99PJ2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim8Q99PJ2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trim8Q99PJ2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trim8Q99PJ2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim8Q99PJ2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim8Q99PJ2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim8Q99PJ2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim8Q99PJ2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Trim8Q99PJ2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim8Q99PJ2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim8Q99PJ2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Trim8Q99PJ2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim8Q99PJ2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim8Q99PJ2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
Trim8Q99PJ2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim8Q99PJ2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.47■□□□□ 0.55
Trim8Q99PJ2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim8Q99PJ2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim8Q99PJ2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.47■□□□□ 0.55
Trim8Q99PJ2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.47■□□□□ 0.55
Trim8Q99PJ2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim8Q99PJ2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.47■□□□□ 0.55
Trim8Q99PJ2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trim8Q99PJ2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim8Q99PJ2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim8Q99PJ2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim8Q99PJ2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim8Q99PJ2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim8Q99PJ2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim8Q99PJ2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim8Q99PJ2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.46■□□□□ 0.55
Trim8Q99PJ2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim8Q99PJ2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim8Q99PJ2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim8Q99PJ2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trim8Q99PJ2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim8Q99PJ2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim8Q99PJ2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trim8Q99PJ2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Trim8Q99PJ2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trim8Q99PJ2 Grk6-206ENSMUST00000224995 2971 ntBASIC18.45■□□□□ 0.54
Trim8Q99PJ2 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.45■□□□□ 0.54
Trim8Q99PJ2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim8Q99PJ2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms