Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cdk5rap3Q99LM2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap3Q99LM2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap3Q99LM2 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.62■□□□□ 0.73
Cdk5rap3Q99LM2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap3Q99LM2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap3Q99LM2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap3Q99LM2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap3Q99LM2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap3Q99LM2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap3Q99LM2 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.61■□□□□ 0.73
Cdk5rap3Q99LM2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap3Q99LM2 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.61■□□□□ 0.73
Cdk5rap3Q99LM2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.61■□□□□ 0.73
Cdk5rap3Q99LM2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.61■□□□□ 0.73
Cdk5rap3Q99LM2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap3Q99LM2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cdk5rap3Q99LM2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap3Q99LM2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap3Q99LM2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap3Q99LM2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap3Q99LM2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap3Q99LM2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk5rap3Q99LM2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk5rap3Q99LM2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk5rap3Q99LM2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cdk5rap3Q99LM2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.6■□□□□ 0.73
Cdk5rap3Q99LM2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk5rap3Q99LM2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk5rap3Q99LM2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk5rap3Q99LM2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Gm12251-201ENSMUST00000117893 792 ntBASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap3Q99LM2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdk5rap3Q99LM2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.58■□□□□ 0.73
Cdk5rap3Q99LM2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
Cdk5rap3Q99LM2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdk5rap3Q99LM2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk5rap3Q99LM2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk5rap3Q99LM2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.58■□□□□ 0.72
Cdk5rap3Q99LM2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk5rap3Q99LM2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk5rap3Q99LM2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap3Q99LM2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap3Q99LM2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap3Q99LM2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap3Q99LM2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap3Q99LM2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap3Q99LM2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.57■□□□□ 0.72
Cdk5rap3Q99LM2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap3Q99LM2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap3Q99LM2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap3Q99LM2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap3Q99LM2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap3Q99LM2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap3Q99LM2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk5rap3Q99LM2 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.55■□□□□ 0.72
Cdk5rap3Q99LM2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk5rap3Q99LM2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.55■□□□□ 0.72
Cdk5rap3Q99LM2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk5rap3Q99LM2 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.55■□□□□ 0.72
Cdk5rap3Q99LM2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk5rap3Q99LM2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk5rap3Q99LM2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cdk5rap3Q99LM2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cdk5rap3Q99LM2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cdk5rap3Q99LM2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms