Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm9Q96EQ9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm9Q96EQ9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm9Q96EQ9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm9Q96EQ9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Prdm9Q96EQ9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm9Q96EQ9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.68■□□□□ 0.58
Prdm9Q96EQ9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm9Q96EQ9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm9Q96EQ9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm9Q96EQ9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm9Q96EQ9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm9Q96EQ9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm9Q96EQ9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm9Q96EQ9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm9Q96EQ9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.66■□□□□ 0.58
Prdm9Q96EQ9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prdm9Q96EQ9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prdm9Q96EQ9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prdm9Q96EQ9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prdm9Q96EQ9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.66■□□□□ 0.58
Prdm9Q96EQ9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.66■□□□□ 0.58
Prdm9Q96EQ9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.66■□□□□ 0.58
Prdm9Q96EQ9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prdm9Q96EQ9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Prdm9Q96EQ9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prdm9Q96EQ9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm9Q96EQ9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm9Q96EQ9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm9Q96EQ9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm9Q96EQ9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Prdm9Q96EQ9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm9Q96EQ9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.65■□□□□ 0.58
Prdm9Q96EQ9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm9Q96EQ9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm9Q96EQ9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm9Q96EQ9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.65■□□□□ 0.58
Prdm9Q96EQ9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm9Q96EQ9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm9Q96EQ9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm9Q96EQ9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm9Q96EQ9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm9Q96EQ9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm9Q96EQ9 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.64■□□□□ 0.57
Prdm9Q96EQ9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm9Q96EQ9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm9Q96EQ9 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.64■□□□□ 0.57
Prdm9Q96EQ9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm9Q96EQ9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm9Q96EQ9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm9Q96EQ9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm9Q96EQ9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm9Q96EQ9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm9Q96EQ9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm9Q96EQ9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Gm13148-201ENSMUST00000118892 745 ntBASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Prdm9Q96EQ9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Prdm9Q96EQ9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm9Q96EQ9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm9Q96EQ9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm9Q96EQ9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm9Q96EQ9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Prdm9Q96EQ9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.62■□□□□ 0.57
Prdm9Q96EQ9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm9Q96EQ9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Prdm9Q96EQ9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm9Q96EQ9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm9Q96EQ9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm9Q96EQ9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prdm9Q96EQ9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms