Protein–RNA interactions for Protein: Q91Y04

Pcdhb15, Protocadherin beta 15, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb15Q91Y04 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb15Q91Y04 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb15Q91Y04 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb15Q91Y04 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb15Q91Y04 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.33■■□□□ 1.01
Pcdhb15Q91Y04 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb15Q91Y04 Gm43137-201ENSMUST00000198052 594 ntBASIC21.33■■□□□ 1.01
Pcdhb15Q91Y04 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.33■■□□□ 1.01
Pcdhb15Q91Y04 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb15Q91Y04 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
Pcdhb15Q91Y04 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.33■■□□□ 1
Pcdhb15Q91Y04 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb15Q91Y04 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb15Q91Y04 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb15Q91Y04 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb15Q91Y04 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb15Q91Y04 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.31■■□□□ 1
Pcdhb15Q91Y04 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.31■■□□□ 1
Pcdhb15Q91Y04 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb15Q91Y04 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb15Q91Y04 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb15Q91Y04 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb15Q91Y04 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb15Q91Y04 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb15Q91Y04 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Pcdhb15Q91Y04 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.31■■□□□ 1
Pcdhb15Q91Y04 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb15Q91Y04 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.3■■□□□ 1
Pcdhb15Q91Y04 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Pcdhb15Q91Y04 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb15Q91Y04 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb15Q91Y04 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb15Q91Y04 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb15Q91Y04 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb15Q91Y04 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Pcdhb15Q91Y04 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb15Q91Y04 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb15Q91Y04 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb15Q91Y04 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Gm9847-201ENSMUST00000052528 599 ntBASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.29■■□□□ 1
Pcdhb15Q91Y04 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhb15Q91Y04 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb15Q91Y04 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Pcdhb15Q91Y04 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb15Q91Y04 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb15Q91Y04 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb15Q91Y04 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb15Q91Y04 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb15Q91Y04 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb15Q91Y04 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb15Q91Y04 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb15Q91Y04 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb15Q91Y04 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb15Q91Y04 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.27■■□□□ 1
Pcdhb15Q91Y04 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb15Q91Y04 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb15Q91Y04 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
Pcdhb15Q91Y04 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pcdhb15Q91Y04 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb15Q91Y04 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb15Q91Y04 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pcdhb15Q91Y04 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb15Q91Y04 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb15Q91Y04 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.26■□□□□ 0.99
Pcdhb15Q91Y04 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.26■□□□□ 0.99
Pcdhb15Q91Y04 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb15Q91Y04 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb15Q91Y04 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pcdhb15Q91Y04 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb15Q91Y04 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb15Q91Y04 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb15Q91Y04 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms