Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb5Q91XZ5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC22.45■■□□□ 1.18
Pcdhb5Q91XZ5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb5Q91XZ5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb5Q91XZ5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
Pcdhb5Q91XZ5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb5Q91XZ5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb5Q91XZ5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.45■■□□□ 1.18
Pcdhb5Q91XZ5 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb5Q91XZ5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC22.44■■□□□ 1.18
Pcdhb5Q91XZ5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.44■■□□□ 1.18
Pcdhb5Q91XZ5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb5Q91XZ5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb5Q91XZ5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Gm10252-201ENSMUST00000209541 832 ntBASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb5Q91XZ5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb5Q91XZ5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb5Q91XZ5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb5Q91XZ5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb5Q91XZ5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb5Q91XZ5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Pcdhb5Q91XZ5 Gm12896-201ENSMUST00000118430 226 ntBASIC22.4■■□□□ 1.18
Pcdhb5Q91XZ5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC22.4■■□□□ 1.18
Pcdhb5Q91XZ5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb5Q91XZ5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb5Q91XZ5 Gm10812-201ENSMUST00000099864 546 ntBASIC22.4■■□□□ 1.18
Pcdhb5Q91XZ5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb5Q91XZ5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb5Q91XZ5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.39■■□□□ 1.18
Pcdhb5Q91XZ5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb5Q91XZ5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Pcdhb5Q91XZ5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.39■■□□□ 1.17
Pcdhb5Q91XZ5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.39■■□□□ 1.17
Pcdhb5Q91XZ5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb5Q91XZ5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.39■■□□□ 1.17
Pcdhb5Q91XZ5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Pcdhb5Q91XZ5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Pcdhb5Q91XZ5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Pcdhb5Q91XZ5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb5Q91XZ5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb5Q91XZ5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb5Q91XZ5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb5Q91XZ5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb5Q91XZ5 Gm27275-201ENSMUST00000184318 272 ntBASIC22.38■■□□□ 1.17
Pcdhb5Q91XZ5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC22.38■■□□□ 1.17
Pcdhb5Q91XZ5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb5Q91XZ5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb5Q91XZ5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhb5Q91XZ5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb5Q91XZ5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhb5Q91XZ5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb5Q91XZ5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb5Q91XZ5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms