Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb8Q91XZ2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb8Q91XZ2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhb8Q91XZ2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb8Q91XZ2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.46■□□□□ 0.55
Pcdhb8Q91XZ2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhb8Q91XZ2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb8Q91XZ2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb8Q91XZ2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhb8Q91XZ2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb8Q91XZ2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb8Q91XZ2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb8Q91XZ2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 Golph3-205ENSMUST00000228671 2842 ntBASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb8Q91XZ2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb8Q91XZ2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb8Q91XZ2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb8Q91XZ2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb8Q91XZ2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb8Q91XZ2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb8Q91XZ2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb8Q91XZ2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb8Q91XZ2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdhb8Q91XZ2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Pcdhb8Q91XZ2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb8Q91XZ2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdhb8Q91XZ2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb8Q91XZ2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb8Q91XZ2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb8Q91XZ2 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.42■□□□□ 0.54
Pcdhb8Q91XZ2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms