Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga3Q91XY5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhga3Q91XY5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhga3Q91XY5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga3Q91XY5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pcdhga3Q91XY5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga3Q91XY5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga3Q91XY5 Gm11421-201ENSMUST00000122124 294 ntBASIC16.81■□□□□ 0.28
Pcdhga3Q91XY5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga3Q91XY5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhga3Q91XY5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga3Q91XY5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga3Q91XY5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga3Q91XY5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga3Q91XY5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga3Q91XY5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga3Q91XY5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga3Q91XY5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga3Q91XY5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga3Q91XY5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhga3Q91XY5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Pcdhga3Q91XY5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdhga3Q91XY5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdhga3Q91XY5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga3Q91XY5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga3Q91XY5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga3Q91XY5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga3Q91XY5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga3Q91XY5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhga3Q91XY5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhga3Q91XY5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhga3Q91XY5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga3Q91XY5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga3Q91XY5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga3Q91XY5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga3Q91XY5 Gm26833-201ENSMUST00000180899 440 ntBASIC16.77■□□□□ 0.28
Pcdhga3Q91XY5 Gm43017-201ENSMUST00000198296 752 ntBASIC16.77■□□□□ 0.28
Pcdhga3Q91XY5 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.77■□□□□ 0.27
Pcdhga3Q91XY5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga3Q91XY5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga3Q91XY5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga3Q91XY5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga3Q91XY5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdhga3Q91XY5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga3Q91XY5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.75■□□□□ 0.27
Pcdhga3Q91XY5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga3Q91XY5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga3Q91XY5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga3Q91XY5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga3Q91XY5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhga3Q91XY5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga3Q91XY5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms