Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb2Q91XX7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Gm5812-201ENSMUST00000061073 957 ntBASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhgb2Q91XX7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb2Q91XX7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb2Q91XX7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb2Q91XX7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhgb2Q91XX7 Gm15546-201ENSMUST00000122095 826 ntBASIC17.79■□□□□ 0.44
Pcdhgb2Q91XX7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb2Q91XX7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdhgb2Q91XX7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb2Q91XX7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb2Q91XX7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhgb2Q91XX7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Serp2-204ENSMUST00000228055 705 ntBASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb2Q91XX7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb2Q91XX7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgb2Q91XX7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgb2Q91XX7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Pcdhgb2Q91XX7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgb2Q91XX7 Grk6-206ENSMUST00000224995 2971 ntBASIC17.76■□□□□ 0.43
Pcdhgb2Q91XX7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb2Q91XX7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb2Q91XX7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhgb2Q91XX7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb2Q91XX7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb2Q91XX7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb2Q91XX7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdhgb2Q91XX7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdhgb2Q91XX7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb2Q91XX7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhgb2Q91XX7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhgb2Q91XX7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb2Q91XX7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb2Q91XX7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb2Q91XX7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb2Q91XX7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb2Q91XX7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb2Q91XX7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhgb2Q91XX7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhgb2Q91XX7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb2Q91XX7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb2Q91XX7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb2Q91XX7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb2Q91XX7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb2Q91XX7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb2Q91XX7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdhgb2Q91XX7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb2Q91XX7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb2Q91XX7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhgb2Q91XX7 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.74■□□□□ 0.43
Pcdhgb2Q91XX7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb2Q91XX7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.74■□□□□ 0.43
Pcdhgb2Q91XX7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms