Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb5Q91XX5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb5Q91XX5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb5Q91XX5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb5Q91XX5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb5Q91XX5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb5Q91XX5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb5Q91XX5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Pcdhgb5Q91XX5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhgb5Q91XX5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhgb5Q91XX5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhgb5Q91XX5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhgb5Q91XX5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhgb5Q91XX5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.83■□□□□ 0.6
Pcdhgb5Q91XX5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.83■□□□□ 0.6
Pcdhgb5Q91XX5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb5Q91XX5 Rab3c-203ENSMUST00000224180 967 ntBASIC18.83■□□□□ 0.6
Pcdhgb5Q91XX5 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.83■□□□□ 0.6
Pcdhgb5Q91XX5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb5Q91XX5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
Pcdhgb5Q91XX5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhgb5Q91XX5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb5Q91XX5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb5Q91XX5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb5Q91XX5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdhgb5Q91XX5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb5Q91XX5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb5Q91XX5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb5Q91XX5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Pcdhgb5Q91XX5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb5Q91XX5 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.82■□□□□ 0.6
Pcdhgb5Q91XX5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb5Q91XX5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb5Q91XX5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Gm13168-201ENSMUST00000121771 632 ntBASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb5Q91XX5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb5Q91XX5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb5Q91XX5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhgb5Q91XX5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.8■□□□□ 0.6
Pcdhgb5Q91XX5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb5Q91XX5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.8■□□□□ 0.6
Pcdhgb5Q91XX5 Gm26524-201ENSMUST00000192339 390 ntBASIC18.8■□□□□ 0.6
Pcdhgb5Q91XX5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhgb5Q91XX5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb5Q91XX5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb5Q91XX5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb5Q91XX5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb5Q91XX5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb5Q91XX5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
Pcdhgb5Q91XX5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb5Q91XX5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdhgb5Q91XX5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb5Q91XX5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhgb5Q91XX5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb5Q91XX5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb5Q91XX5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb5Q91XX5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb5Q91XX5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb5Q91XX5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb5Q91XX5 Trmt13-210ENSMUST00000198454 880 ntBASIC18.78■□□□□ 0.6
Pcdhgb5Q91XX5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb5Q91XX5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb5Q91XX5 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.78■□□□□ 0.6
Pcdhgb5Q91XX5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhgb5Q91XX5 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.77■□□□□ 0.6
Pcdhgb5Q91XX5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhgb5Q91XX5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb5Q91XX5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb5Q91XX5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.77■□□□□ 0.6
Pcdhgb5Q91XX5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb5Q91XX5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb5Q91XX5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhgb5Q91XX5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb5Q91XX5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhgb5Q91XX5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb5Q91XX5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb5Q91XX5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb5Q91XX5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb5Q91XX5 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.76■□□□□ 0.59
Pcdhgb5Q91XX5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb5Q91XX5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms