Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tram1Q91V04 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tram1Q91V04 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tram1Q91V04 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tram1Q91V04 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.34■□□□□ 0.21
Tram1Q91V04 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tram1Q91V04 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tram1Q91V04 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tram1Q91V04 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tram1Q91V04 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tram1Q91V04 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tram1Q91V04 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Tram1Q91V04 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tram1Q91V04 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Tram1Q91V04 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Tram1Q91V04 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tram1Q91V04 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tram1Q91V04 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.33■□□□□ 0.2
Tram1Q91V04 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tram1Q91V04 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tram1Q91V04 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.33■□□□□ 0.2
Tram1Q91V04 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tram1Q91V04 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tram1Q91V04 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Tram1Q91V04 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tram1Q91V04 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tram1Q91V04 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tram1Q91V04 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.32■□□□□ 0.2
Tram1Q91V04 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.32■□□□□ 0.2
Tram1Q91V04 Gm43566-201ENSMUST00000196851 808 ntBASIC16.32■□□□□ 0.2
Tram1Q91V04 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.32■□□□□ 0.2
Tram1Q91V04 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
Tram1Q91V04 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tram1Q91V04 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tram1Q91V04 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tram1Q91V04 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tram1Q91V04 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Rarb-207ENSMUST00000225921 2756 ntBASIC16.31■□□□□ 0.2
Tram1Q91V04 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Etf1-202ENSMUST00000180351 108 ntBASIC16.31■□□□□ 0.2
Tram1Q91V04 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Gm10232-201ENSMUST00000089221 720 ntBASIC16.31■□□□□ 0.2
Tram1Q91V04 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.31■□□□□ 0.2
Tram1Q91V04 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tram1Q91V04 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tram1Q91V04 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tram1Q91V04 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tram1Q91V04 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.3■□□□□ 0.2
Tram1Q91V04 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tram1Q91V04 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tram1Q91V04 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.3■□□□□ 0.2
Tram1Q91V04 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.3■□□□□ 0.2
Tram1Q91V04 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tram1Q91V04 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.3■□□□□ 0.2
Tram1Q91V04 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tram1Q91V04 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tram1Q91V04 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tram1Q91V04 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tram1Q91V04 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tram1Q91V04 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tram1Q91V04 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
Tram1Q91V04 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Mir6538-201ENSMUST00000183713 110 ntBASIC16.29■□□□□ 0.2
Tram1Q91V04 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Tram1Q91V04 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.29■□□□□ 0.2
Tram1Q91V04 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Gm40881-201ENSMUST00000223397 166 ntBASIC16.29■□□□□ 0.2
Tram1Q91V04 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Tram1Q91V04 Gm9870-201ENSMUST00000063874 645 ntBASIC16.29■□□□□ 0.2
Tram1Q91V04 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tram1Q91V04 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tram1Q91V04 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tram1Q91V04 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms