Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdh18Q8VHR0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh18Q8VHR0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pcdh18Q8VHR0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh18Q8VHR0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh18Q8VHR0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh18Q8VHR0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh18Q8VHR0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh18Q8VHR0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdh18Q8VHR0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.18■□□□□ 0.5
Pcdh18Q8VHR0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh18Q8VHR0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.18■□□□□ 0.5
Pcdh18Q8VHR0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.18■□□□□ 0.5
Pcdh18Q8VHR0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh18Q8VHR0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh18Q8VHR0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh18Q8VHR0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh18Q8VHR0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh18Q8VHR0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdh18Q8VHR0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.17■□□□□ 0.5
Pcdh18Q8VHR0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.17■□□□□ 0.5
Pcdh18Q8VHR0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh18Q8VHR0 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.17■□□□□ 0.5
Pcdh18Q8VHR0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh18Q8VHR0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh18Q8VHR0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.15■□□□□ 0.5
Pcdh18Q8VHR0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh18Q8VHR0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.15■□□□□ 0.5
Pcdh18Q8VHR0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdh18Q8VHR0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdh18Q8VHR0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdh18Q8VHR0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh18Q8VHR0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdh18Q8VHR0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh18Q8VHR0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh18Q8VHR0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
Pcdh18Q8VHR0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.14■□□□□ 0.49
Pcdh18Q8VHR0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdh18Q8VHR0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh18Q8VHR0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Pcdh18Q8VHR0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh18Q8VHR0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh18Q8VHR0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh18Q8VHR0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh18Q8VHR0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh18Q8VHR0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh18Q8VHR0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh18Q8VHR0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh18Q8VHR0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh18Q8VHR0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh18Q8VHR0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 335.2 ms