Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40bQ8VHP8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40bQ8VHP8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40bQ8VHP8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40bQ8VHP8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Serp2-204ENSMUST00000228055 705 ntBASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Rab40bQ8VHP8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rab40bQ8VHP8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab40bQ8VHP8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab40bQ8VHP8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Rab40bQ8VHP8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab40bQ8VHP8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab40bQ8VHP8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.04■□□□□ 0.32
Rab40bQ8VHP8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab40bQ8VHP8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rab40bQ8VHP8 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.04■□□□□ 0.32
Rab40bQ8VHP8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab40bQ8VHP8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab40bQ8VHP8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab40bQ8VHP8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.03■□□□□ 0.32
Rab40bQ8VHP8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab40bQ8VHP8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.03■□□□□ 0.32
Rab40bQ8VHP8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rab40bQ8VHP8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab40bQ8VHP8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab40bQ8VHP8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab40bQ8VHP8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab40bQ8VHP8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab40bQ8VHP8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rab40bQ8VHP8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rab40bQ8VHP8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab40bQ8VHP8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab40bQ8VHP8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab40bQ8VHP8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab40bQ8VHP8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab40bQ8VHP8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab40bQ8VHP8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab40bQ8VHP8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab40bQ8VHP8 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.02■□□□□ 0.31
Rab40bQ8VHP8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
Rab40bQ8VHP8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rab40bQ8VHP8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rab40bQ8VHP8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Rab40bQ8VHP8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rab40bQ8VHP8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17■□□□□ 0.31
Rab40bQ8VHP8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rab40bQ8VHP8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab40bQ8VHP8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab40bQ8VHP8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab40bQ8VHP8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17■□□□□ 0.31
Rab40bQ8VHP8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rab40bQ8VHP8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab40bQ8VHP8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rab40bQ8VHP8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rab40bQ8VHP8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms