Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Retreg1dQ8VE91 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retreg1dQ8VE91 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retreg1dQ8VE91 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retreg1dQ8VE91 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg1dQ8VE91 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg1dQ8VE91 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg1dQ8VE91 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg1dQ8VE91 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg1dQ8VE91 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Retreg1dQ8VE91 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Retreg1dQ8VE91 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg1dQ8VE91 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.71■□□□□ 0.59
Retreg1dQ8VE91 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg1dQ8VE91 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg1dQ8VE91 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg1dQ8VE91 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg1dQ8VE91 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retreg1dQ8VE91 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg1dQ8VE91 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg1dQ8VE91 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg1dQ8VE91 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg1dQ8VE91 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg1dQ8VE91 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg1dQ8VE91 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg1dQ8VE91 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg1dQ8VE91 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.7■□□□□ 0.58
Retreg1dQ8VE91 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.7■□□□□ 0.58
Retreg1dQ8VE91 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg1dQ8VE91 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retreg1dQ8VE91 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retreg1dQ8VE91 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.69■□□□□ 0.58
Retreg1dQ8VE91 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retreg1dQ8VE91 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retreg1dQ8VE91 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retreg1dQ8VE91 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retreg1dQ8VE91 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retreg1dQ8VE91 Gm7514-201ENSMUST00000209475 934 ntBASIC18.67■□□□□ 0.58
Retreg1dQ8VE91 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retreg1dQ8VE91 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.67■□□□□ 0.58
Retreg1dQ8VE91 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retreg1dQ8VE91 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retreg1dQ8VE91 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Retreg1dQ8VE91 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg1dQ8VE91 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Retreg1dQ8VE91 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg1dQ8VE91 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg1dQ8VE91 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg1dQ8VE91 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg1dQ8VE91 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg1dQ8VE91 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg1dQ8VE91 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.66■□□□□ 0.58
Retreg1dQ8VE91 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg1dQ8VE91 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Retreg1dQ8VE91 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg1dQ8VE91 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.66■□□□□ 0.58
Retreg1dQ8VE91 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg1dQ8VE91 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Retreg1dQ8VE91 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retreg1dQ8VE91 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Retreg1dQ8VE91 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retreg1dQ8VE91 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retreg1dQ8VE91 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms