Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Rprd1aQ8VDS4 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.47■□□□□ 0.71
Rprd1aQ8VDS4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rprd1aQ8VDS4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.47■□□□□ 0.71
Rprd1aQ8VDS4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.47■□□□□ 0.71
Rprd1aQ8VDS4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.47■□□□□ 0.71
Rprd1aQ8VDS4 Gm7514-201ENSMUST00000209475 934 ntBASIC19.47■□□□□ 0.71
Rprd1aQ8VDS4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rprd1aQ8VDS4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rprd1aQ8VDS4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rprd1aQ8VDS4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rprd1aQ8VDS4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Rprd1aQ8VDS4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.46■□□□□ 0.71
Rprd1aQ8VDS4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rprd1aQ8VDS4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rprd1aQ8VDS4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rprd1aQ8VDS4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rprd1aQ8VDS4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rprd1aQ8VDS4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rprd1aQ8VDS4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rprd1aQ8VDS4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rprd1aQ8VDS4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rprd1aQ8VDS4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.45■□□□□ 0.7
Rprd1aQ8VDS4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rprd1aQ8VDS4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.45■□□□□ 0.7
Rprd1aQ8VDS4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rprd1aQ8VDS4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rprd1aQ8VDS4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rprd1aQ8VDS4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rprd1aQ8VDS4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rprd1aQ8VDS4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rprd1aQ8VDS4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rprd1aQ8VDS4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rprd1aQ8VDS4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rprd1aQ8VDS4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rprd1aQ8VDS4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rprd1aQ8VDS4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.44■□□□□ 0.7
Rprd1aQ8VDS4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rprd1aQ8VDS4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rprd1aQ8VDS4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rprd1aQ8VDS4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.43■□□□□ 0.7
Rprd1aQ8VDS4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.43■□□□□ 0.7
Rprd1aQ8VDS4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Rprd1aQ8VDS4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rprd1aQ8VDS4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rprd1aQ8VDS4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rprd1aQ8VDS4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rprd1aQ8VDS4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rprd1aQ8VDS4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rprd1aQ8VDS4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rprd1aQ8VDS4 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.4■□□□□ 0.7
Rprd1aQ8VDS4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rprd1aQ8VDS4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rprd1aQ8VDS4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rprd1aQ8VDS4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rprd1aQ8VDS4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rprd1aQ8VDS4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rprd1aQ8VDS4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rprd1aQ8VDS4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rprd1aQ8VDS4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Rprd1aQ8VDS4 Gm13534-201ENSMUST00000121169 513 ntBASIC19.39■□□□□ 0.69
Rprd1aQ8VDS4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.39■□□□□ 0.69
Rprd1aQ8VDS4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rprd1aQ8VDS4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rprd1aQ8VDS4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rprd1aQ8VDS4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms