Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a20aQ8VDB9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Slc6a20aQ8VDB9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a20aQ8VDB9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Gm7860-201ENSMUST00000121190 879 ntBASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a20aQ8VDB9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Slc6a20aQ8VDB9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20aQ8VDB9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20aQ8VDB9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20aQ8VDB9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20aQ8VDB9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Slc6a20aQ8VDB9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.68■□□□□ 0.58
Slc6a20aQ8VDB9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Slc6a20aQ8VDB9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20aQ8VDB9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20aQ8VDB9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20aQ8VDB9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20aQ8VDB9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20aQ8VDB9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a20aQ8VDB9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Slc6a20aQ8VDB9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20aQ8VDB9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Slc6a20aQ8VDB9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20aQ8VDB9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20aQ8VDB9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20aQ8VDB9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a20aQ8VDB9 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.66■□□□□ 0.58
Slc6a20aQ8VDB9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20aQ8VDB9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20aQ8VDB9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20aQ8VDB9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20aQ8VDB9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20aQ8VDB9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20aQ8VDB9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20aQ8VDB9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20aQ8VDB9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20aQ8VDB9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20aQ8VDB9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20aQ8VDB9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20aQ8VDB9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms