Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna3Q8R4G9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.62■□□□□ 0.57
Chrna3Q8R4G9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna3Q8R4G9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna3Q8R4G9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna3Q8R4G9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna3Q8R4G9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chrna3Q8R4G9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Chrna3Q8R4G9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chrna3Q8R4G9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chrna3Q8R4G9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chrna3Q8R4G9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.61■□□□□ 0.57
Chrna3Q8R4G9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chrna3Q8R4G9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chrna3Q8R4G9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Chrna3Q8R4G9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Chrna3Q8R4G9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna3Q8R4G9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna3Q8R4G9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Chrna3Q8R4G9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna3Q8R4G9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Chrna3Q8R4G9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna3Q8R4G9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna3Q8R4G9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna3Q8R4G9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna3Q8R4G9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Chrna3Q8R4G9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Chrna3Q8R4G9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chrna3Q8R4G9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chrna3Q8R4G9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chrna3Q8R4G9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Chrna3Q8R4G9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.58■□□□□ 0.56
Chrna3Q8R4G9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.58■□□□□ 0.56
Chrna3Q8R4G9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Chrna3Q8R4G9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chrna3Q8R4G9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Chrna3Q8R4G9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.58■□□□□ 0.56
Chrna3Q8R4G9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chrna3Q8R4G9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna3Q8R4G9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna3Q8R4G9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna3Q8R4G9 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.57■□□□□ 0.56
Chrna3Q8R4G9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.57■□□□□ 0.56
Chrna3Q8R4G9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Chrna3Q8R4G9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna3Q8R4G9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.56■□□□□ 0.56
Chrna3Q8R4G9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna3Q8R4G9 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.56■□□□□ 0.56
Chrna3Q8R4G9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna3Q8R4G9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Chrna3Q8R4G9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna3Q8R4G9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna3Q8R4G9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna3Q8R4G9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Chrna3Q8R4G9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna3Q8R4G9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.55■□□□□ 0.56
Chrna3Q8R4G9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.55■□□□□ 0.56
Chrna3Q8R4G9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Chrna3Q8R4G9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Chrna3Q8R4G9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna3Q8R4G9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna3Q8R4G9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna3Q8R4G9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna3Q8R4G9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna3Q8R4G9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna3Q8R4G9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna3Q8R4G9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.54■□□□□ 0.56
Chrna3Q8R4G9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna3Q8R4G9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna3Q8R4G9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna3Q8R4G9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Chrna3Q8R4G9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna3Q8R4G9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.54■□□□□ 0.56
Chrna3Q8R4G9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna3Q8R4G9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna3Q8R4G9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna3Q8R4G9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna3Q8R4G9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna3Q8R4G9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna3Q8R4G9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Chrna3Q8R4G9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna3Q8R4G9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms