Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.21■□□□□ 0.99
Atp2a1Q8R429 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atp2a1Q8R429 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atp2a1Q8R429 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atp2a1Q8R429 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atp2a1Q8R429 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Atp2a1Q8R429 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Atp2a1Q8R429 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Atp2a1Q8R429 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 Gm6211-202ENSMUST00000167849 925 ntBASIC21.2■□□□□ 0.98
Atp2a1Q8R429 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atp2a1Q8R429 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atp2a1Q8R429 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atp2a1Q8R429 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Atp2a1Q8R429 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Atp2a1Q8R429 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atp2a1Q8R429 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Atp2a1Q8R429 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.19■□□□□ 0.98
Atp2a1Q8R429 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atp2a1Q8R429 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atp2a1Q8R429 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atp2a1Q8R429 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Atp2a1Q8R429 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Atp2a1Q8R429 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atp2a1Q8R429 Golph3-202ENSMUST00000226517 2359 ntBASIC21.18■□□□□ 0.98
Atp2a1Q8R429 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Atp2a1Q8R429 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atp2a1Q8R429 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Atp2a1Q8R429 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Atp2a1Q8R429 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.18■□□□□ 0.98
Atp2a1Q8R429 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Atp2a1Q8R429 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.18■□□□□ 0.98
Atp2a1Q8R429 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atp2a1Q8R429 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atp2a1Q8R429 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atp2a1Q8R429 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atp2a1Q8R429 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Atp2a1Q8R429 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Atp2a1Q8R429 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atp2a1Q8R429 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Atp2a1Q8R429 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.17■□□□□ 0.98
Atp2a1Q8R429 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.17■□□□□ 0.98
Atp2a1Q8R429 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Atp2a1Q8R429 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Atp2a1Q8R429 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atp2a1Q8R429 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Atp2a1Q8R429 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atp2a1Q8R429 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atp2a1Q8R429 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atp2a1Q8R429 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atp2a1Q8R429 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atp2a1Q8R429 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.16■□□□□ 0.98
Atp2a1Q8R429 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atp2a1Q8R429 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atp2a1Q8R429 Gm12527-201ENSMUST00000117967 564 ntBASIC21.16■□□□□ 0.98
Atp2a1Q8R429 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.16■□□□□ 0.98
Atp2a1Q8R429 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Atp2a1Q8R429 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atp2a1Q8R429 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atp2a1Q8R429 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atp2a1Q8R429 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atp2a1Q8R429 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atp2a1Q8R429 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atp2a1Q8R429 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atp2a1Q8R429 Gm10653-202ENSMUST00000139570 835 ntBASIC21.15■□□□□ 0.98
Atp2a1Q8R429 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Atp2a1Q8R429 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atp2a1Q8R429 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Atp2a1Q8R429 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atp2a1Q8R429 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atp2a1Q8R429 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.14■□□□□ 0.97
Atp2a1Q8R429 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Atp2a1Q8R429 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atp2a1Q8R429 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atp2a1Q8R429 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.14■□□□□ 0.97
Atp2a1Q8R429 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atp2a1Q8R429 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.13■□□□□ 0.97
Atp2a1Q8R429 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.13■□□□□ 0.97
Atp2a1Q8R429 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atp2a1Q8R429 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atp2a1Q8R429 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.13■□□□□ 0.97
Atp2a1Q8R429 Gm5408-201ENSMUST00000197998 747 ntBASIC21.13■□□□□ 0.97
Atp2a1Q8R429 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Atp2a1Q8R429 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atp2a1Q8R429 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atp2a1Q8R429 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atp2a1Q8R429 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms