Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup58Q8R332 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup58Q8R332 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.24■□□□□ 0.83
Nup58Q8R332 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Nup58Q8R332 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nup58Q8R332 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup58Q8R332 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Nup58Q8R332 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Nup58Q8R332 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup58Q8R332 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Nup58Q8R332 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup58Q8R332 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Nup58Q8R332 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.24■□□□□ 0.83
Nup58Q8R332 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.24■□□□□ 0.83
Nup58Q8R332 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup58Q8R332 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nup58Q8R332 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup58Q8R332 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup58Q8R332 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup58Q8R332 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup58Q8R332 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup58Q8R332 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup58Q8R332 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup58Q8R332 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.23■□□□□ 0.83
Nup58Q8R332 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nup58Q8R332 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.23■□□□□ 0.83
Nup58Q8R332 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup58Q8R332 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup58Q8R332 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nup58Q8R332 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nup58Q8R332 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.23■□□□□ 0.83
Nup58Q8R332 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup58Q8R332 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup58Q8R332 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.22■□□□□ 0.83
Nup58Q8R332 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nup58Q8R332 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nup58Q8R332 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup58Q8R332 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nup58Q8R332 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup58Q8R332 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Nup58Q8R332 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup58Q8R332 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup58Q8R332 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup58Q8R332 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.21■□□□□ 0.83
Nup58Q8R332 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nup58Q8R332 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup58Q8R332 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nup58Q8R332 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nup58Q8R332 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup58Q8R332 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup58Q8R332 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup58Q8R332 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Nup58Q8R332 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup58Q8R332 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup58Q8R332 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nup58Q8R332 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nup58Q8R332 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nup58Q8R332 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nup58Q8R332 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup58Q8R332 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup58Q8R332 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup58Q8R332 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nup58Q8R332 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Nup58Q8R332 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup58Q8R332 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nup58Q8R332 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup58Q8R332 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup58Q8R332 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.19■□□□□ 0.82
Nup58Q8R332 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.19■□□□□ 0.82
Nup58Q8R332 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup58Q8R332 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Nup58Q8R332 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.18■□□□□ 0.82
Nup58Q8R332 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup58Q8R332 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup58Q8R332 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.18■□□□□ 0.82
Nup58Q8R332 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Nup58Q8R332 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Nup58Q8R332 Gm8493-201ENSMUST00000196881 489 ntBASIC20.18■□□□□ 0.82
Nup58Q8R332 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.18■□□□□ 0.82
Nup58Q8R332 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nup58Q8R332 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup58Q8R332 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup58Q8R332 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nup58Q8R332 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup58Q8R332 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
Nup58Q8R332 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup58Q8R332 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup58Q8R332 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup58Q8R332 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nup58Q8R332 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup58Q8R332 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup58Q8R332 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nup58Q8R332 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.17■□□□□ 0.82
Nup58Q8R332 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup58Q8R332 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nup58Q8R332 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nup58Q8R332 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nup58Q8R332 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nup58Q8R332 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Nup58Q8R332 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms