Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nudcd3Q8R1N4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nudcd3Q8R1N4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nudcd3Q8R1N4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nudcd3Q8R1N4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nudcd3Q8R1N4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nudcd3Q8R1N4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Nudcd3Q8R1N4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nudcd3Q8R1N4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Nudcd3Q8R1N4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Nudcd3Q8R1N4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Nudcd3Q8R1N4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nudcd3Q8R1N4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nudcd3Q8R1N4 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.94■□□□□ 0.62
Nudcd3Q8R1N4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nudcd3Q8R1N4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.94■□□□□ 0.62
Nudcd3Q8R1N4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nudcd3Q8R1N4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nudcd3Q8R1N4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nudcd3Q8R1N4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nudcd3Q8R1N4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.94■□□□□ 0.62
Nudcd3Q8R1N4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nudcd3Q8R1N4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nudcd3Q8R1N4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nudcd3Q8R1N4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Nudcd3Q8R1N4 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.93■□□□□ 0.62
Nudcd3Q8R1N4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nudcd3Q8R1N4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.93■□□□□ 0.62
Nudcd3Q8R1N4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
Nudcd3Q8R1N4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nudcd3Q8R1N4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nudcd3Q8R1N4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nudcd3Q8R1N4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.92■□□□□ 0.62
Nudcd3Q8R1N4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Nudcd3Q8R1N4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nudcd3Q8R1N4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Nudcd3Q8R1N4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nudcd3Q8R1N4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nudcd3Q8R1N4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nudcd3Q8R1N4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nudcd3Q8R1N4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nudcd3Q8R1N4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nudcd3Q8R1N4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Nudcd3Q8R1N4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nudcd3Q8R1N4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nudcd3Q8R1N4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Nudcd3Q8R1N4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nudcd3Q8R1N4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nudcd3Q8R1N4 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.91■□□□□ 0.62
Nudcd3Q8R1N4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nudcd3Q8R1N4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nudcd3Q8R1N4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nudcd3Q8R1N4 Rarb-207ENSMUST00000225921 2756 ntBASIC18.91■□□□□ 0.62
Nudcd3Q8R1N4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nudcd3Q8R1N4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nudcd3Q8R1N4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nudcd3Q8R1N4 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nudcd3Q8R1N4 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.89■□□□□ 0.62
Nudcd3Q8R1N4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nudcd3Q8R1N4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Nudcd3Q8R1N4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nudcd3Q8R1N4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Nudcd3Q8R1N4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nudcd3Q8R1N4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nudcd3Q8R1N4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nudcd3Q8R1N4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nudcd3Q8R1N4 Grk6-206ENSMUST00000224995 2971 ntBASIC18.89■□□□□ 0.61
Nudcd3Q8R1N4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nudcd3Q8R1N4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nudcd3Q8R1N4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nudcd3Q8R1N4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nudcd3Q8R1N4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nudcd3Q8R1N4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nudcd3Q8R1N4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nudcd3Q8R1N4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.88■□□□□ 0.61
Nudcd3Q8R1N4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nudcd3Q8R1N4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Nudcd3Q8R1N4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nudcd3Q8R1N4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nudcd3Q8R1N4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nudcd3Q8R1N4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms