Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zcchc9Q8R1J3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Zcchc9Q8R1J3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zcchc9Q8R1J3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Zcchc9Q8R1J3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zcchc9Q8R1J3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.88■□□□□ 0.61
Zcchc9Q8R1J3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zcchc9Q8R1J3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zcchc9Q8R1J3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zcchc9Q8R1J3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zcchc9Q8R1J3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Zcchc9Q8R1J3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zcchc9Q8R1J3 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.88■□□□□ 0.61
Zcchc9Q8R1J3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Zcchc9Q8R1J3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Zcchc9Q8R1J3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Zcchc9Q8R1J3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zcchc9Q8R1J3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Zcchc9Q8R1J3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.87■□□□□ 0.61
Zcchc9Q8R1J3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Zcchc9Q8R1J3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Zcchc9Q8R1J3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zcchc9Q8R1J3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zcchc9Q8R1J3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zcchc9Q8R1J3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zcchc9Q8R1J3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Gm7290-201ENSMUST00000104990 617 ntBASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Gm12918-201ENSMUST00000120234 636 ntBASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Gm15710-201ENSMUST00000121821 636 ntBASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Gm20760-201ENSMUST00000179197 648 ntBASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Gm5075-201ENSMUST00000196916 622 ntBASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zcchc9Q8R1J3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zcchc9Q8R1J3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Zcchc9Q8R1J3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zcchc9Q8R1J3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zcchc9Q8R1J3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zcchc9Q8R1J3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Zcchc9Q8R1J3 Gm12527-201ENSMUST00000117967 564 ntBASIC18.85■□□□□ 0.61
Zcchc9Q8R1J3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.85■□□□□ 0.61
Zcchc9Q8R1J3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Zcchc9Q8R1J3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Zcchc9Q8R1J3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Zcchc9Q8R1J3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zcchc9Q8R1J3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Zcchc9Q8R1J3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zcchc9Q8R1J3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.84■□□□□ 0.61
Zcchc9Q8R1J3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zcchc9Q8R1J3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zcchc9Q8R1J3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zcchc9Q8R1J3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zcchc9Q8R1J3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Zcchc9Q8R1J3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Zcchc9Q8R1J3 Gm22240-201ENSMUST00000175225 82 ntBASIC18.84■□□□□ 0.61
Zcchc9Q8R1J3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Zcchc9Q8R1J3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Zcchc9Q8R1J3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zcchc9Q8R1J3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Zcchc9Q8R1J3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Zcchc9Q8R1J3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Zcchc9Q8R1J3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Zcchc9Q8R1J3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Zcchc9Q8R1J3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Zcchc9Q8R1J3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Zcchc9Q8R1J3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.83■□□□□ 0.6
Zcchc9Q8R1J3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zcchc9Q8R1J3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zcchc9Q8R1J3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zcchc9Q8R1J3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zcchc9Q8R1J3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zcchc9Q8R1J3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zcchc9Q8R1J3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zcchc9Q8R1J3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zcchc9Q8R1J3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zcchc9Q8R1J3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Zcchc9Q8R1J3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms