Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atf7Q8R0S1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atf7Q8R0S1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atf7Q8R0S1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atf7Q8R0S1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atf7Q8R0S1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atf7Q8R0S1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Atf7Q8R0S1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Atf7Q8R0S1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Gm43231-201ENSMUST00000202960 2258 ntBASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Atf7Q8R0S1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Atf7Q8R0S1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Atf7Q8R0S1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Atf7Q8R0S1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Atf7Q8R0S1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Atf7Q8R0S1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Atf7Q8R0S1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Atf7Q8R0S1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Atf7Q8R0S1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Atf7Q8R0S1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Atf7Q8R0S1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Atf7Q8R0S1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Atf7Q8R0S1 Gm38205-201ENSMUST00000192243 258 ntBASIC22.39■■□□□ 1.17
Atf7Q8R0S1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Atf7Q8R0S1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
Atf7Q8R0S1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.39■■□□□ 1.17
Atf7Q8R0S1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Atf7Q8R0S1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Atf7Q8R0S1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.39■■□□□ 1.17
Atf7Q8R0S1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Atf7Q8R0S1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Atf7Q8R0S1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Atf7Q8R0S1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Atf7Q8R0S1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Atf7Q8R0S1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Atf7Q8R0S1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Atf7Q8R0S1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
Atf7Q8R0S1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Atf7Q8R0S1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Atf7Q8R0S1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Atf7Q8R0S1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Atf7Q8R0S1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC22.38■■□□□ 1.17
Atf7Q8R0S1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Atf7Q8R0S1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Atf7Q8R0S1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Atf7Q8R0S1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Atf7Q8R0S1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Atf7Q8R0S1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Atf7Q8R0S1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Atf7Q8R0S1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Atf7Q8R0S1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Atf7Q8R0S1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Atf7Q8R0S1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Atf7Q8R0S1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Atf7Q8R0S1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Atf7Q8R0S1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms