Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Iqck-206ENSMUST00000208658 2891 ntBASIC17.88■□□□□ 0.45
Clrn1Q8K445 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.88■□□□□ 0.45
Clrn1Q8K445 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.88■□□□□ 0.45
Clrn1Q8K445 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn1Q8K445 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn1Q8K445 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Clrn1Q8K445 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn1Q8K445 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn1Q8K445 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn1Q8K445 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn1Q8K445 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.87■□□□□ 0.45
Clrn1Q8K445 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn1Q8K445 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
Clrn1Q8K445 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
Clrn1Q8K445 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn1Q8K445 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.87■□□□□ 0.45
Clrn1Q8K445 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn1Q8K445 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Clrn1Q8K445 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.86■□□□□ 0.45
Clrn1Q8K445 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Clrn1Q8K445 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Clrn1Q8K445 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn1Q8K445 Gm9988-201ENSMUST00000069786 435 ntBASIC17.86■□□□□ 0.45
Clrn1Q8K445 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Clrn1Q8K445 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn1Q8K445 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Clrn1Q8K445 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn1Q8K445 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn1Q8K445 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn1Q8K445 Gm7860-201ENSMUST00000121190 879 ntBASIC17.85■□□□□ 0.45
Clrn1Q8K445 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn1Q8K445 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn1Q8K445 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn1Q8K445 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn1Q8K445 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn1Q8K445 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn1Q8K445 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn1Q8K445 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn1Q8K445 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Clrn1Q8K445 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn1Q8K445 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn1Q8K445 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn1Q8K445 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn1Q8K445 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.84■□□□□ 0.45
Clrn1Q8K445 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn1Q8K445 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn1Q8K445 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn1Q8K445 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Clrn1Q8K445 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn1Q8K445 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.84■□□□□ 0.45
Clrn1Q8K445 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn1Q8K445 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.84■□□□□ 0.45
Clrn1Q8K445 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn1Q8K445 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn1Q8K445 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Clrn1Q8K445 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clrn1Q8K445 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Clrn1Q8K445 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Clrn1Q8K445 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn1Q8K445 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Clrn1Q8K445 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn1Q8K445 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.82■□□□□ 0.44
Clrn1Q8K445 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn1Q8K445 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn1Q8K445 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.81■□□□□ 0.44
Clrn1Q8K445 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn1Q8K445 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn1Q8K445 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn1Q8K445 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn1Q8K445 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn1Q8K445 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn1Q8K445 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms