Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC11.87□□□□□ -0.51
Cystm1Q8K353 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC11.87□□□□□ -0.51
Cystm1Q8K353 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cystm1Q8K353 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC11.86□□□□□ -0.51
Cystm1Q8K353 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC11.86□□□□□ -0.51
Cystm1Q8K353 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Cystm1Q8K353 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cystm1Q8K353 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Gm9847-201ENSMUST00000052528 599 ntBASIC11.85□□□□□ -0.51
Cystm1Q8K353 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cystm1Q8K353 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cystm1Q8K353 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC11.84□□□□□ -0.51
Cystm1Q8K353 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cystm1Q8K353 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cystm1Q8K353 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cystm1Q8K353 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cystm1Q8K353 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms