Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cchcr1Q8K2I2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Cchcr1Q8K2I2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Cchcr1Q8K2I2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Cchcr1Q8K2I2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cchcr1Q8K2I2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Cchcr1Q8K2I2 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.42■■□□□ 1.18
Cchcr1Q8K2I2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC22.42■■□□□ 1.18
Cchcr1Q8K2I2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Cchcr1Q8K2I2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cchcr1Q8K2I2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cchcr1Q8K2I2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cchcr1Q8K2I2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Cchcr1Q8K2I2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cchcr1Q8K2I2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cchcr1Q8K2I2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cchcr1Q8K2I2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cchcr1Q8K2I2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cchcr1Q8K2I2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cchcr1Q8K2I2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Cchcr1Q8K2I2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cchcr1Q8K2I2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cchcr1Q8K2I2 Gm27801-201ENSMUST00000184174 223 ntBASIC22.4■■□□□ 1.18
Cchcr1Q8K2I2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Cchcr1Q8K2I2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
Cchcr1Q8K2I2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cchcr1Q8K2I2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
Cchcr1Q8K2I2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cchcr1Q8K2I2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Cchcr1Q8K2I2 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.39■■□□□ 1.17
Cchcr1Q8K2I2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Cchcr1Q8K2I2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Cchcr1Q8K2I2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cchcr1Q8K2I2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Cchcr1Q8K2I2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
Cchcr1Q8K2I2 Dapk1-207ENSMUST00000226059 5009 ntBASIC22.39■■□□□ 1.17
Cchcr1Q8K2I2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Cchcr1Q8K2I2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Cchcr1Q8K2I2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cchcr1Q8K2I2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC22.39■■□□□ 1.17
Cchcr1Q8K2I2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cchcr1Q8K2I2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cchcr1Q8K2I2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Cchcr1Q8K2I2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cchcr1Q8K2I2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cchcr1Q8K2I2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cchcr1Q8K2I2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cchcr1Q8K2I2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cchcr1Q8K2I2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.38■■□□□ 1.17
Cchcr1Q8K2I2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.38■■□□□ 1.17
Cchcr1Q8K2I2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cchcr1Q8K2I2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Cchcr1Q8K2I2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cchcr1Q8K2I2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC22.38■■□□□ 1.17
Cchcr1Q8K2I2 Gm6627-201ENSMUST00000218299 2386 ntBASIC22.38■■□□□ 1.17
Cchcr1Q8K2I2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Gm27454-201ENSMUST00000185090 204 ntBASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cchcr1Q8K2I2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cchcr1Q8K2I2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cchcr1Q8K2I2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cchcr1Q8K2I2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cchcr1Q8K2I2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cchcr1Q8K2I2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cchcr1Q8K2I2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC22.36■■□□□ 1.17
Cchcr1Q8K2I2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cchcr1Q8K2I2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
Cchcr1Q8K2I2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Cchcr1Q8K2I2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.35■■□□□ 1.17
Cchcr1Q8K2I2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Cchcr1Q8K2I2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
Cchcr1Q8K2I2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cchcr1Q8K2I2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cchcr1Q8K2I2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Cchcr1Q8K2I2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cchcr1Q8K2I2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.35■■□□□ 1.17
Cchcr1Q8K2I2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cchcr1Q8K2I2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cchcr1Q8K2I2 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.35■■□□□ 1.17
Cchcr1Q8K2I2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cchcr1Q8K2I2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cchcr1Q8K2I2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cchcr1Q8K2I2 Gm7860-201ENSMUST00000121190 879 ntBASIC22.34■■□□□ 1.17
Cchcr1Q8K2I2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC22.34■■□□□ 1.17
Cchcr1Q8K2I2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.34■■□□□ 1.17
Cchcr1Q8K2I2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cchcr1Q8K2I2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms