Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd3Q8CIK8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd3Q8CIK8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd3Q8CIK8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd3Q8CIK8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd3Q8CIK8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd3Q8CIK8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd3Q8CIK8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd3Q8CIK8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd3Q8CIK8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rfwd3Q8CIK8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd3Q8CIK8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfwd3Q8CIK8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rfwd3Q8CIK8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rfwd3Q8CIK8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.77■□□□□ 0.44
Rfwd3Q8CIK8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfwd3Q8CIK8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.77■□□□□ 0.44
Rfwd3Q8CIK8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rfwd3Q8CIK8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rfwd3Q8CIK8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.77■□□□□ 0.43
Rfwd3Q8CIK8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfwd3Q8CIK8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfwd3Q8CIK8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rfwd3Q8CIK8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 Gm8495-201ENSMUST00000188740 694 ntBASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 Gm5874-201ENSMUST00000096101 508 ntBASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.76■□□□□ 0.43
Rfwd3Q8CIK8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd3Q8CIK8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd3Q8CIK8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd3Q8CIK8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd3Q8CIK8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd3Q8CIK8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd3Q8CIK8 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.74■□□□□ 0.43
Rfwd3Q8CIK8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.74■□□□□ 0.43
Rfwd3Q8CIK8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd3Q8CIK8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Rfwd3Q8CIK8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms