Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Depdc1aQ8CIG0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Depdc1aQ8CIG0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Depdc1aQ8CIG0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Gm12441-201ENSMUST00000121806 588 ntBASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1aQ8CIG0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1aQ8CIG0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Depdc1aQ8CIG0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc1aQ8CIG0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
Depdc1aQ8CIG0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.47■■□□□ 1.03
Depdc1aQ8CIG0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc1aQ8CIG0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.47■■□□□ 1.03
Depdc1aQ8CIG0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc1aQ8CIG0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc1aQ8CIG0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc1aQ8CIG0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc1aQ8CIG0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc1aQ8CIG0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc1aQ8CIG0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc1aQ8CIG0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Depdc1aQ8CIG0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.46■■□□□ 1.03
Depdc1aQ8CIG0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.46■■□□□ 1.03
Depdc1aQ8CIG0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc1aQ8CIG0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc1aQ8CIG0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc1aQ8CIG0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc1aQ8CIG0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Depdc1aQ8CIG0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Depdc1aQ8CIG0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Depdc1aQ8CIG0 Gm5408-201ENSMUST00000197998 747 ntBASIC21.45■■□□□ 1.02
Depdc1aQ8CIG0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Depdc1aQ8CIG0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Depdc1aQ8CIG0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Depdc1aQ8CIG0 Golph3-202ENSMUST00000226517 2359 ntBASIC21.44■■□□□ 1.02
Depdc1aQ8CIG0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Depdc1aQ8CIG0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Depdc1aQ8CIG0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
Depdc1aQ8CIG0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Depdc1aQ8CIG0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.44■■□□□ 1.02
Depdc1aQ8CIG0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Depdc1aQ8CIG0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Depdc1aQ8CIG0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Depdc1aQ8CIG0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Depdc1aQ8CIG0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Depdc1aQ8CIG0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Depdc1aQ8CIG0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1aQ8CIG0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1aQ8CIG0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.43■■□□□ 1.02
Depdc1aQ8CIG0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1aQ8CIG0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1aQ8CIG0 Gm26524-201ENSMUST00000192339 390 ntBASIC21.43■■□□□ 1.02
Depdc1aQ8CIG0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1aQ8CIG0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.43■■□□□ 1.02
Depdc1aQ8CIG0 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.43■■□□□ 1.02
Depdc1aQ8CIG0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Depdc1aQ8CIG0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1aQ8CIG0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1aQ8CIG0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1aQ8CIG0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
Depdc1aQ8CIG0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Depdc1aQ8CIG0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Depdc1aQ8CIG0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.42■■□□□ 1.02
Depdc1aQ8CIG0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.42■■□□□ 1.02
Depdc1aQ8CIG0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Depdc1aQ8CIG0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Depdc1aQ8CIG0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.42■■□□□ 1.02
Depdc1aQ8CIG0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms