Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.03■□□□□ 0.64
Clip4Q8CI96 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clip4Q8CI96 Gm11421-201ENSMUST00000122124 294 ntBASIC19.03■□□□□ 0.64
Clip4Q8CI96 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.03■□□□□ 0.64
Clip4Q8CI96 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clip4Q8CI96 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clip4Q8CI96 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clip4Q8CI96 Gm18284-201ENSMUST00000172604 624 ntBASIC19.03■□□□□ 0.64
Clip4Q8CI96 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip4Q8CI96 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip4Q8CI96 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Clip4Q8CI96 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clip4Q8CI96 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip4Q8CI96 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip4Q8CI96 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip4Q8CI96 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip4Q8CI96 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clip4Q8CI96 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Clip4Q8CI96 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.02■□□□□ 0.64
Clip4Q8CI96 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clip4Q8CI96 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Clip4Q8CI96 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clip4Q8CI96 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clip4Q8CI96 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clip4Q8CI96 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clip4Q8CI96 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Clip4Q8CI96 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.01■□□□□ 0.63
Clip4Q8CI96 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip4Q8CI96 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip4Q8CI96 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clip4Q8CI96 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.01■□□□□ 0.63
Clip4Q8CI96 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip4Q8CI96 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clip4Q8CI96 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clip4Q8CI96 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clip4Q8CI96 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Clip4Q8CI96 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clip4Q8CI96 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19■□□□□ 0.63
Clip4Q8CI96 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19■□□□□ 0.63
Clip4Q8CI96 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clip4Q8CI96 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clip4Q8CI96 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19■□□□□ 0.63
Clip4Q8CI96 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Clip4Q8CI96 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Clip4Q8CI96 Gm43231-201ENSMUST00000202960 2258 ntBASIC19■□□□□ 0.63
Clip4Q8CI96 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19■□□□□ 0.63
Clip4Q8CI96 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19■□□□□ 0.63
Clip4Q8CI96 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clip4Q8CI96 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clip4Q8CI96 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.99■□□□□ 0.63
Clip4Q8CI96 Gm8495-201ENSMUST00000188740 694 ntBASIC18.99■□□□□ 0.63
Clip4Q8CI96 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.99■□□□□ 0.63
Clip4Q8CI96 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clip4Q8CI96 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Clip4Q8CI96 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Clip4Q8CI96 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clip4Q8CI96 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Clip4Q8CI96 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip4Q8CI96 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip4Q8CI96 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Clip4Q8CI96 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
Clip4Q8CI96 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Clip4Q8CI96 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clip4Q8CI96 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.98■□□□□ 0.63
Clip4Q8CI96 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Clip4Q8CI96 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clip4Q8CI96 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Clip4Q8CI96 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clip4Q8CI96 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip4Q8CI96 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip4Q8CI96 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip4Q8CI96 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip4Q8CI96 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Clip4Q8CI96 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip4Q8CI96 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Clip4Q8CI96 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip4Q8CI96 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip4Q8CI96 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip4Q8CI96 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip4Q8CI96 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip4Q8CI96 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip4Q8CI96 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip4Q8CI96 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.97■□□□□ 0.63
Clip4Q8CI96 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip4Q8CI96 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.96■□□□□ 0.63
Clip4Q8CI96 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms