Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sox30Q8CGW4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sox30Q8CGW4 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.84■□□□□ 0.93
Sox30Q8CGW4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sox30Q8CGW4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox30Q8CGW4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Sox30Q8CGW4 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.84■□□□□ 0.93
Sox30Q8CGW4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox30Q8CGW4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox30Q8CGW4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sox30Q8CGW4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox30Q8CGW4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.83■□□□□ 0.93
Sox30Q8CGW4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox30Q8CGW4 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.83■□□□□ 0.93
Sox30Q8CGW4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox30Q8CGW4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox30Q8CGW4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox30Q8CGW4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox30Q8CGW4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox30Q8CGW4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sox30Q8CGW4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sox30Q8CGW4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox30Q8CGW4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sox30Q8CGW4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox30Q8CGW4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox30Q8CGW4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.82■□□□□ 0.92
Sox30Q8CGW4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Sox30Q8CGW4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.82■□□□□ 0.92
Sox30Q8CGW4 Rps24-207ENSMUST00000224568 714 ntBASIC20.82■□□□□ 0.92
Sox30Q8CGW4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sox30Q8CGW4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.82■□□□□ 0.92
Sox30Q8CGW4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Sox30Q8CGW4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Sox30Q8CGW4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox30Q8CGW4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Sox30Q8CGW4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox30Q8CGW4 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.81■□□□□ 0.92
Sox30Q8CGW4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox30Q8CGW4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Sox30Q8CGW4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox30Q8CGW4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox30Q8CGW4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Sox30Q8CGW4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox30Q8CGW4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox30Q8CGW4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox30Q8CGW4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox30Q8CGW4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox30Q8CGW4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox30Q8CGW4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox30Q8CGW4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Sox30Q8CGW4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox30Q8CGW4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sox30Q8CGW4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox30Q8CGW4 Gm12251-201ENSMUST00000117893 792 ntBASIC20.8■□□□□ 0.92
Sox30Q8CGW4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.8■□□□□ 0.92
Sox30Q8CGW4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox30Q8CGW4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Sox30Q8CGW4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox30Q8CGW4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox30Q8CGW4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox30Q8CGW4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox30Q8CGW4 Gm7860-201ENSMUST00000121190 879 ntBASIC20.79■□□□□ 0.92
Sox30Q8CGW4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.79■□□□□ 0.92
Sox30Q8CGW4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox30Q8CGW4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox30Q8CGW4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox30Q8CGW4 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.79■□□□□ 0.92
Sox30Q8CGW4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sox30Q8CGW4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox30Q8CGW4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox30Q8CGW4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox30Q8CGW4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.78■□□□□ 0.92
Sox30Q8CGW4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.78■□□□□ 0.92
Sox30Q8CGW4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sox30Q8CGW4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox30Q8CGW4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox30Q8CGW4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sox30Q8CGW4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sox30Q8CGW4 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.78■□□□□ 0.92
Sox30Q8CGW4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox30Q8CGW4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sox30Q8CGW4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox30Q8CGW4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox30Q8CGW4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sox30Q8CGW4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Sox30Q8CGW4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.78■□□□□ 0.92
Sox30Q8CGW4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox30Q8CGW4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.77■□□□□ 0.92
Sox30Q8CGW4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Sox30Q8CGW4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox30Q8CGW4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox30Q8CGW4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.77■□□□□ 0.92
Sox30Q8CGW4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.77■□□□□ 0.92
Sox30Q8CGW4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox30Q8CGW4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox30Q8CGW4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox30Q8CGW4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox30Q8CGW4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox30Q8CGW4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Sox30Q8CGW4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms