Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh1Q8CGV4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh1Q8CGV4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh1Q8CGV4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh1Q8CGV4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rdh1Q8CGV4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh1Q8CGV4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Rdh1Q8CGV4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rdh1Q8CGV4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rdh1Q8CGV4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rdh1Q8CGV4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rdh1Q8CGV4 Gm27011-201ENSMUST00000182352 972 ntBASIC18.46■□□□□ 0.55
Rdh1Q8CGV4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rdh1Q8CGV4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rdh1Q8CGV4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rdh1Q8CGV4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rdh1Q8CGV4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rdh1Q8CGV4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rdh1Q8CGV4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Rdh1Q8CGV4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rdh1Q8CGV4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh1Q8CGV4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh1Q8CGV4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh1Q8CGV4 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.44■□□□□ 0.54
Rdh1Q8CGV4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh1Q8CGV4 Gm5408-201ENSMUST00000197998 747 ntBASIC18.44■□□□□ 0.54
Rdh1Q8CGV4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh1Q8CGV4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh1Q8CGV4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh1Q8CGV4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh1Q8CGV4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh1Q8CGV4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rdh1Q8CGV4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rdh1Q8CGV4 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Gm12441-201ENSMUST00000121806 588 ntBASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Gm4968-201ENSMUST00000071458 858 ntBASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Rdh1Q8CGV4 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.41■□□□□ 0.54
Rdh1Q8CGV4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rdh1Q8CGV4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rdh1Q8CGV4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Rdh1Q8CGV4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.41■□□□□ 0.54
Rdh1Q8CGV4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.41■□□□□ 0.54
Rdh1Q8CGV4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rdh1Q8CGV4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rdh1Q8CGV4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rdh1Q8CGV4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms