Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.39■■□□□ 1.17
Rbm28Q8CGC6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rbm28Q8CGC6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rbm28Q8CGC6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rbm28Q8CGC6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rbm28Q8CGC6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Rbm28Q8CGC6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rbm28Q8CGC6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 Gm13534-201ENSMUST00000121169 513 ntBASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rbm28Q8CGC6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rbm28Q8CGC6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rbm28Q8CGC6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rbm28Q8CGC6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC22.37■■□□□ 1.17
Rbm28Q8CGC6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rbm28Q8CGC6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rbm28Q8CGC6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rbm28Q8CGC6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rbm28Q8CGC6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC22.36■■□□□ 1.17
Rbm28Q8CGC6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC22.36■■□□□ 1.17
Rbm28Q8CGC6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rbm28Q8CGC6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rbm28Q8CGC6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.36■■□□□ 1.17
Rbm28Q8CGC6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Rbm28Q8CGC6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.36■■□□□ 1.17
Rbm28Q8CGC6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rbm28Q8CGC6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rbm28Q8CGC6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rbm28Q8CGC6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rbm28Q8CGC6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rbm28Q8CGC6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Rbm28Q8CGC6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Rbm28Q8CGC6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rbm28Q8CGC6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rbm28Q8CGC6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.35■■□□□ 1.17
Rbm28Q8CGC6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Rbm28Q8CGC6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rbm28Q8CGC6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rbm28Q8CGC6 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.35■■□□□ 1.17
Rbm28Q8CGC6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Rbm28Q8CGC6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rbm28Q8CGC6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC22.34■■□□□ 1.17
Rbm28Q8CGC6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rbm28Q8CGC6 Gm6420-201ENSMUST00000193885 723 ntBASIC22.34■■□□□ 1.17
Rbm28Q8CGC6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rbm28Q8CGC6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rbm28Q8CGC6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rbm28Q8CGC6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rbm28Q8CGC6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.32■■□□□ 1.16
Rbm28Q8CGC6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rbm28Q8CGC6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.32■■□□□ 1.16
Rbm28Q8CGC6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Rbm28Q8CGC6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.32■■□□□ 1.16
Rbm28Q8CGC6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Rbm28Q8CGC6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
Rbm28Q8CGC6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rbm28Q8CGC6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rbm28Q8CGC6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rbm28Q8CGC6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rbm28Q8CGC6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rbm28Q8CGC6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rbm28Q8CGC6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rbm28Q8CGC6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rbm28Q8CGC6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rbm28Q8CGC6 Gm7290-201ENSMUST00000104990 617 ntBASIC22.31■■□□□ 1.16
Rbm28Q8CGC6 Gm12918-201ENSMUST00000120234 636 ntBASIC22.31■■□□□ 1.16
Rbm28Q8CGC6 Gm7860-201ENSMUST00000121190 879 ntBASIC22.31■■□□□ 1.16
Rbm28Q8CGC6 Gm15710-201ENSMUST00000121821 636 ntBASIC22.31■■□□□ 1.16
Rbm28Q8CGC6 Gm5075-201ENSMUST00000196916 622 ntBASIC22.31■■□□□ 1.16
Rbm28Q8CGC6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rbm28Q8CGC6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC22.31■■□□□ 1.16
Rbm28Q8CGC6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC22.31■■□□□ 1.16
Rbm28Q8CGC6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Rbm28Q8CGC6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rbm28Q8CGC6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rbm28Q8CGC6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rbm28Q8CGC6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rbm28Q8CGC6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC22.3■■□□□ 1.16
Rbm28Q8CGC6 Gm12441-201ENSMUST00000121806 588 ntBASIC22.3■■□□□ 1.16
Rbm28Q8CGC6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.3■■□□□ 1.16
Rbm28Q8CGC6 Nespas-201ENSMUST00000143738 1083 ntBASIC22.3■■□□□ 1.16
Rbm28Q8CGC6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rbm28Q8CGC6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rbm28Q8CGC6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Rbm28Q8CGC6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
Rbm28Q8CGC6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Rbm28Q8CGC6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC22.29■■□□□ 1.16
Rbm28Q8CGC6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms