Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab43Q8CG50 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rab43Q8CG50 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rab43Q8CG50 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.51■□□□□ 0.55
Rab43Q8CG50 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
Rab43Q8CG50 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab43Q8CG50 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab43Q8CG50 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.51■□□□□ 0.55
Rab43Q8CG50 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab43Q8CG50 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab43Q8CG50 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rab43Q8CG50 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab43Q8CG50 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab43Q8CG50 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rab43Q8CG50 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rab43Q8CG50 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.5■□□□□ 0.55
Rab43Q8CG50 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.5■□□□□ 0.55
Rab43Q8CG50 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.5■□□□□ 0.55
Rab43Q8CG50 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab43Q8CG50 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rab43Q8CG50 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab43Q8CG50 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab43Q8CG50 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab43Q8CG50 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab43Q8CG50 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab43Q8CG50 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.49■□□□□ 0.55
Rab43Q8CG50 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.49■□□□□ 0.55
Rab43Q8CG50 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab43Q8CG50 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rab43Q8CG50 Gm10812-201ENSMUST00000099864 546 ntBASIC18.49■□□□□ 0.55
Rab43Q8CG50 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab43Q8CG50 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab43Q8CG50 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab43Q8CG50 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.49■□□□□ 0.55
Rab43Q8CG50 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab43Q8CG50 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rab43Q8CG50 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rab43Q8CG50 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.49■□□□□ 0.55
Rab43Q8CG50 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab43Q8CG50 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rab43Q8CG50 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.48■□□□□ 0.55
Rab43Q8CG50 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.48■□□□□ 0.55
Rab43Q8CG50 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab43Q8CG50 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rab43Q8CG50 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.48■□□□□ 0.55
Rab43Q8CG50 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rab43Q8CG50 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab43Q8CG50 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab43Q8CG50 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rab43Q8CG50 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab43Q8CG50 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab43Q8CG50 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rab43Q8CG50 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab43Q8CG50 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.47■□□□□ 0.55
Rab43Q8CG50 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.47■□□□□ 0.55
Rab43Q8CG50 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.47■□□□□ 0.55
Rab43Q8CG50 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.47■□□□□ 0.55
Rab43Q8CG50 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab43Q8CG50 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab43Q8CG50 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rab43Q8CG50 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab43Q8CG50 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab43Q8CG50 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab43Q8CG50 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.46■□□□□ 0.55
Rab43Q8CG50 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.46■□□□□ 0.55
Rab43Q8CG50 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab43Q8CG50 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.46■□□□□ 0.55
Rab43Q8CG50 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.46■□□□□ 0.55
Rab43Q8CG50 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rab43Q8CG50 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab43Q8CG50 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab43Q8CG50 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rab43Q8CG50 Gm10252-201ENSMUST00000209541 832 ntBASIC18.45■□□□□ 0.54
Rab43Q8CG50 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.45■□□□□ 0.54
Rab43Q8CG50 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rab43Q8CG50 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rab43Q8CG50 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab43Q8CG50 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab43Q8CG50 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Rab43Q8CG50 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab43Q8CG50 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab43Q8CG50 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rab43Q8CG50 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rab43Q8CG50 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rab43Q8CG50 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab43Q8CG50 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms