Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2bQ8CFI7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2bQ8CFI7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2bQ8CFI7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2bQ8CFI7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2bQ8CFI7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2bQ8CFI7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Polr2bQ8CFI7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Polr2bQ8CFI7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Gm7514-201ENSMUST00000209475 934 ntBASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2bQ8CFI7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Polr2bQ8CFI7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Polr2bQ8CFI7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Polr2bQ8CFI7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Polr2bQ8CFI7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Polr2bQ8CFI7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.33■□□□□ 0.85
Polr2bQ8CFI7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.33■□□□□ 0.85
Polr2bQ8CFI7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.33■□□□□ 0.85
Polr2bQ8CFI7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.33■□□□□ 0.85
Polr2bQ8CFI7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Polr2bQ8CFI7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Polr2bQ8CFI7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Polr2bQ8CFI7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Polr2bQ8CFI7 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.33■□□□□ 0.84
Polr2bQ8CFI7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Polr2bQ8CFI7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Polr2bQ8CFI7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Polr2bQ8CFI7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Polr2bQ8CFI7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Polr2bQ8CFI7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Polr2bQ8CFI7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2bQ8CFI7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2bQ8CFI7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Polr2bQ8CFI7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2bQ8CFI7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2bQ8CFI7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Polr2bQ8CFI7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2bQ8CFI7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2bQ8CFI7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr2bQ8CFI7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2bQ8CFI7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Polr2bQ8CFI7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Polr2bQ8CFI7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.31■□□□□ 0.84
Polr2bQ8CFI7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.31■□□□□ 0.84
Polr2bQ8CFI7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2bQ8CFI7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Polr2bQ8CFI7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2bQ8CFI7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr2bQ8CFI7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2bQ8CFI7 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.3■□□□□ 0.84
Polr2bQ8CFI7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2bQ8CFI7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr2bQ8CFI7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.3■□□□□ 0.84
Polr2bQ8CFI7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Polr2bQ8CFI7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2bQ8CFI7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2bQ8CFI7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2bQ8CFI7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2bQ8CFI7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Polr2bQ8CFI7 Gm37179-201ENSMUST00000194862 823 ntBASIC20.29■□□□□ 0.84
Polr2bQ8CFI7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.29■□□□□ 0.84
Polr2bQ8CFI7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2bQ8CFI7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2bQ8CFI7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2bQ8CFI7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2bQ8CFI7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr2bQ8CFI7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2bQ8CFI7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2bQ8CFI7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2bQ8CFI7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Polr2bQ8CFI7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2bQ8CFI7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr2bQ8CFI7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.28■□□□□ 0.84
Polr2bQ8CFI7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr2bQ8CFI7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.27■□□□□ 0.84
Polr2bQ8CFI7 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.27■□□□□ 0.84
Polr2bQ8CFI7 Gm13534-201ENSMUST00000121169 513 ntBASIC20.27■□□□□ 0.84
Polr2bQ8CFI7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Polr2bQ8CFI7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.27■□□□□ 0.84
Polr2bQ8CFI7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Polr2bQ8CFI7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.27■□□□□ 0.84
Polr2bQ8CFI7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Polr2bQ8CFI7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Polr2bQ8CFI7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms