Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Pabpn1Q8CCS6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Pabpn1Q8CCS6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pabpn1Q8CCS6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
Pabpn1Q8CCS6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pabpn1Q8CCS6 Gm7153-201ENSMUST00000117092 455 ntBASIC29.92■■■□□ 2.38
Pabpn1Q8CCS6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pabpn1Q8CCS6 Gm43909-201ENSMUST00000203443 1876 ntBASIC29.92■■■□□ 2.38
Pabpn1Q8CCS6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pabpn1Q8CCS6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Pabpn1Q8CCS6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pabpn1Q8CCS6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pabpn1Q8CCS6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Pabpn1Q8CCS6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
Pabpn1Q8CCS6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
Pabpn1Q8CCS6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC29.91■■■□□ 2.38
Pabpn1Q8CCS6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Pabpn1Q8CCS6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Pabpn1Q8CCS6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
Pabpn1Q8CCS6 Gm7712-202ENSMUST00000222331 1510 ntBASIC29.91■■■□□ 2.38
Pabpn1Q8CCS6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Pabpn1Q8CCS6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Pabpn1Q8CCS6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Pabpn1Q8CCS6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC29.89■■■□□ 2.38
Pabpn1Q8CCS6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Pabpn1Q8CCS6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pabpn1Q8CCS6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Pabpn1Q8CCS6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Pabpn1Q8CCS6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pabpn1Q8CCS6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC29.88■■■□□ 2.37
Pabpn1Q8CCS6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pabpn1Q8CCS6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC29.87■■■□□ 2.37
Pabpn1Q8CCS6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Pabpn1Q8CCS6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Pabpn1Q8CCS6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Pabpn1Q8CCS6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Pabpn1Q8CCS6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Pabpn1Q8CCS6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
Pabpn1Q8CCS6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
Pabpn1Q8CCS6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pabpn1Q8CCS6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC29.86■■■□□ 2.37
Pabpn1Q8CCS6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pabpn1Q8CCS6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pabpn1Q8CCS6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Pabpn1Q8CCS6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
Pabpn1Q8CCS6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
Pabpn1Q8CCS6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Pabpn1Q8CCS6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Pabpn1Q8CCS6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Pabpn1Q8CCS6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Pabpn1Q8CCS6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Pabpn1Q8CCS6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC29.84■■■□□ 2.37
Pabpn1Q8CCS6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Pabpn1Q8CCS6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Pabpn1Q8CCS6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Pabpn1Q8CCS6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Pabpn1Q8CCS6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
Pabpn1Q8CCS6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
Pabpn1Q8CCS6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC29.83■■■□□ 2.37
Pabpn1Q8CCS6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Pabpn1Q8CCS6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Pabpn1Q8CCS6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Pabpn1Q8CCS6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC29.82■■■□□ 2.36
Pabpn1Q8CCS6 Gm6443-201ENSMUST00000203599 874 ntBASIC29.82■■■□□ 2.36
Pabpn1Q8CCS6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC29.82■■■□□ 2.36
Pabpn1Q8CCS6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Pabpn1Q8CCS6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
Pabpn1Q8CCS6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Pabpn1Q8CCS6 Gm25016-201ENSMUST00000158399 131 ntBASIC29.81■■■□□ 2.36
Pabpn1Q8CCS6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Pabpn1Q8CCS6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Pabpn1Q8CCS6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Pabpn1Q8CCS6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Pabpn1Q8CCS6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Pabpn1Q8CCS6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
Pabpn1Q8CCS6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pabpn1Q8CCS6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pabpn1Q8CCS6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pabpn1Q8CCS6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC29.79■■■□□ 2.36
Pabpn1Q8CCS6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pabpn1Q8CCS6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pabpn1Q8CCS6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pabpn1Q8CCS6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC29.79■■■□□ 2.36
Pabpn1Q8CCS6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Pabpn1Q8CCS6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pabpn1Q8CCS6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC29.79■■■□□ 2.36
Pabpn1Q8CCS6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pabpn1Q8CCS6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Pabpn1Q8CCS6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Pabpn1Q8CCS6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC29.78■■■□□ 2.36
Pabpn1Q8CCS6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pabpn1Q8CCS6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pabpn1Q8CCS6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Pabpn1Q8CCS6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Pabpn1Q8CCS6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
Pabpn1Q8CCS6 Gm18025-201ENSMUST00000221733 862 ntBASIC29.77■■■□□ 2.36
Pabpn1Q8CCS6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Pabpn1Q8CCS6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
Pabpn1Q8CCS6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
Pabpn1Q8CCS6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms