Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rfx6Q8C7R7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx6Q8C7R7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx6Q8C7R7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx6Q8C7R7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx6Q8C7R7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx6Q8C7R7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.24■□□□□ 0.67
Rfx6Q8C7R7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx6Q8C7R7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx6Q8C7R7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx6Q8C7R7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx6Q8C7R7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx6Q8C7R7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.24■□□□□ 0.67
Rfx6Q8C7R7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx6Q8C7R7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx6Q8C7R7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rfx6Q8C7R7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx6Q8C7R7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx6Q8C7R7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx6Q8C7R7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.23■□□□□ 0.67
Rfx6Q8C7R7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx6Q8C7R7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rfx6Q8C7R7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx6Q8C7R7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx6Q8C7R7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx6Q8C7R7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx6Q8C7R7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx6Q8C7R7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx6Q8C7R7 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.2■□□□□ 0.66
Rfx6Q8C7R7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Rfx6Q8C7R7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rfx6Q8C7R7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx6Q8C7R7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Rfx6Q8C7R7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx6Q8C7R7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx6Q8C7R7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rfx6Q8C7R7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx6Q8C7R7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx6Q8C7R7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx6Q8C7R7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx6Q8C7R7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx6Q8C7R7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rfx6Q8C7R7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.19■□□□□ 0.66
Rfx6Q8C7R7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx6Q8C7R7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rfx6Q8C7R7 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.19■□□□□ 0.66
Rfx6Q8C7R7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx6Q8C7R7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rfx6Q8C7R7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx6Q8C7R7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx6Q8C7R7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx6Q8C7R7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx6Q8C7R7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx6Q8C7R7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx6Q8C7R7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx6Q8C7R7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx6Q8C7R7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rfx6Q8C7R7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx6Q8C7R7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rfx6Q8C7R7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rfx6Q8C7R7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx6Q8C7R7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx6Q8C7R7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx6Q8C7R7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx6Q8C7R7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx6Q8C7R7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.17■□□□□ 0.66
Rfx6Q8C7R7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rfx6Q8C7R7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx6Q8C7R7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rfx6Q8C7R7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms