Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.68■□□□□ 0.9
Lin9Q8C735 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Lin9Q8C735 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.68■□□□□ 0.9
Lin9Q8C735 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lin9Q8C735 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Lin9Q8C735 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lin9Q8C735 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lin9Q8C735 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Lin9Q8C735 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lin9Q8C735 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lin9Q8C735 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lin9Q8C735 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.67■□□□□ 0.9
Lin9Q8C735 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lin9Q8C735 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lin9Q8C735 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lin9Q8C735 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lin9Q8C735 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lin9Q8C735 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lin9Q8C735 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lin9Q8C735 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lin9Q8C735 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lin9Q8C735 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lin9Q8C735 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lin9Q8C735 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lin9Q8C735 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lin9Q8C735 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lin9Q8C735 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
Lin9Q8C735 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lin9Q8C735 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Lin9Q8C735 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lin9Q8C735 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.65■□□□□ 0.9
Lin9Q8C735 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lin9Q8C735 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lin9Q8C735 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lin9Q8C735 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.65■□□□□ 0.9
Lin9Q8C735 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.65■□□□□ 0.9
Lin9Q8C735 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lin9Q8C735 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lin9Q8C735 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lin9Q8C735 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Lin9Q8C735 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Lin9Q8C735 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.65■□□□□ 0.9
Lin9Q8C735 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Lin9Q8C735 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.64■□□□□ 0.9
Lin9Q8C735 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lin9Q8C735 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lin9Q8C735 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lin9Q8C735 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lin9Q8C735 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.64■□□□□ 0.89
Lin9Q8C735 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lin9Q8C735 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.64■□□□□ 0.89
Lin9Q8C735 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lin9Q8C735 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lin9Q8C735 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lin9Q8C735 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lin9Q8C735 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Lin9Q8C735 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lin9Q8C735 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
Lin9Q8C735 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lin9Q8C735 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lin9Q8C735 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lin9Q8C735 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.63■□□□□ 0.89
Lin9Q8C735 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.62■□□□□ 0.89
Lin9Q8C735 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Lin9Q8C735 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lin9Q8C735 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lin9Q8C735 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lin9Q8C735 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lin9Q8C735 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lin9Q8C735 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lin9Q8C735 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Lin9Q8C735 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lin9Q8C735 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lin9Q8C735 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lin9Q8C735 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Lin9Q8C735 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Lin9Q8C735 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lin9Q8C735 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Lin9Q8C735 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lin9Q8C735 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lin9Q8C735 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lin9Q8C735 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lin9Q8C735 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.61■□□□□ 0.89
Lin9Q8C735 Gm27801-201ENSMUST00000184174 223 ntBASIC20.61■□□□□ 0.89
Lin9Q8C735 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.61■□□□□ 0.89
Lin9Q8C735 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lin9Q8C735 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Lin9Q8C735 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lin9Q8C735 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lin9Q8C735 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lin9Q8C735 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lin9Q8C735 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lin9Q8C735 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lin9Q8C735 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lin9Q8C735 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lin9Q8C735 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lin9Q8C735 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lin9Q8C735 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lin9Q8C735 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Lin9Q8C735 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms